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Zinc metabolism and transcriptome and metabolome profiling in Plasmodium falciparum: The effects of traditional antimalarials and metal chelators.

机译:恶性疟原虫中的锌代谢,转录组和代谢组谱分析:传统抗疟药和金属螯合剂的作用。

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摘要

Zinc and other transition metals are essential for cellular chemistry in all organisms. Part of the work described in this thesis focuses on three aspects of zinc metabolism in the malaria parasite, Plasmodium falciparum.; The first aspect is to study zinc transport by isolated malaria parasites and parasites within the infected erythrocyte. We find that despite living within an environment containing rich sources of zinc, the malaria parasite still needs to obtain extracellular zinc. Zinc transport was time, temperature, concentration and pH dependent and also exhibited saturable kinetics. In addition, labile pools of zinc were present within parasites but not within erythrocytes suggesting zinc transport processes may provide bioavailable zinc to the parasite. Also, we show that parasites are susceptible to both zinc chelation and excess zinc.; Secondly, the expression and localization of a zinc transporter was also examined. PfZnT, by sequence and structural homology belongs to the Cation Diffusion Family (CDF) of zinc transporters involved in cellular zinc detoxification. The expression of PfZnT was studied in parasites as well as in a heterologous mammalian system. We find that PfZnT partially colocalizes with a trans-golgi network marker to a peri-nuclear region in COS cells. We show that the intracellular soluble domain of PfZnT containing conserved histidine residues binds zinc, copper, cobalt and zinc in vitro.; Another area of zinc metabolism studied is zinc protoporphyrin IX (ZnPPIX) inhibition of neutral lipid mediated heme crystallization. Inhibition was temperature and pH dependent and unlike the quinoline antimalarials, irreversible.; Finally, the effects of metal chelators and antimalarials on the transcriptome and metabolome of the parasite was studied. We discovered that the transcriptome of P. falciparum is rigid and unresponsive to drug perturbations. Preliminary analysis on the metabolome indicate that metabolite fluxes change with drug treatment and can be measured in isolated parasites or in infected erythrocytes.; Taken together, the studies presented in this thesis work, has lead to a better understanding of zinc metabolism in the malaria parasite. Preliminary work on metabolic profiling in P. falciparum, presented here, has laid the foundation for more rigorous analysis of metabolite fluxes in response to drug.
机译:锌和其他过渡金属对于所有生物中的细胞化学至关重要。本文所描述的部分工作集中在疟原虫恶性疟原虫中锌代谢的三个方面。第一个方面是研究分离的疟原虫和感染的红细胞内的寄生虫对锌的转运。我们发现,尽管生活在含有丰富锌源的环境中,疟原虫仍需要获得细胞外锌。锌的运输受时间,温度,浓度和pH的影响,并且还表现出饱和的动力学。另外,在寄生虫中存在不稳定的锌库,但在红细胞中却不存在,这表明锌的运输过程可能为寄生虫提供了生物可利用的锌。同样,我们表明寄生虫对锌螯合和过量锌均敏感。其次,还研究了锌转运蛋白的表达和定位。通过序列和结构同源性,PfZnT属于参与细胞锌解毒的锌转运蛋白的阳离子扩散家族(CDF)。研究了PfZnT在寄生虫以及异源哺乳动物系统中的表达。我们发现PfZnT与反式高尔基体网络标记部分共定位到COS细胞中的核周区域。我们表明,含有保守组氨酸残基的PfZnT的胞内可溶性域在体外与锌,铜,钴和锌结合。锌代谢的另一个研究领域是锌原卟啉IX(ZnPPIX)抑制中性脂质介导的血红素结晶。抑制作用是温度和pH依赖性的,与喹啉抗疟药不同,抑制作用是不可逆的。最后,研究了金属螯合剂和抗疟药对寄生虫转录组和代谢组的影响。我们发现恶性疟原虫的转录组是刚性的并且对药物扰动没有反应。代谢组学的初步分析表明,代谢物通量会随着药物治疗而变化,并且可以在孤立的寄生虫或感染的红细胞中进行测量。综上所述,本论文所进行的研究使人们对疟疾寄生虫中锌的代谢有了更好的了解。本文介绍的恶性疟原虫代谢谱研究的初步工作为更严格地分析药物对代谢物通量的分析奠定了基础。

著录项

  • 作者单位

    The Johns Hopkins University.;

  • 授予单位 The Johns Hopkins University.;
  • 学科 Biology Molecular.
  • 学位 Ph.D.
  • 年度 2007
  • 页码 167 p.
  • 总页数 167
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 分子遗传学;
  • 关键词

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