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Preliminary Genetic Studies on Resistance to Powdery Mildew in Cucumber

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CONTENTS

Abstract

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Chapter 1:General Introduction

1.1 General life cycle of powdery mildews

1.2 Effect of temperature on the development of powdery mildews

1.3 Inheritance of powdery mildew resistance and relation to temperature

1.4 References

Chapter 2:Literature Review

2.1 Markers,populations and map construction

2.1.1 Genetic markers

2.1.2 Mapping population

2.1.3 Map construction

2.2 Statistical methods for QTL mapping.

2.2.1 Single marker analysis

2.2.2 Interval mapping

2.2.3 Composite interval mapping

2.2.4 Multiple interval mapping

2.3 Epistatic and environmental interactions for quantitative trait loci

2.4 QTL mapping in Cucubitaceae species

2.4.1 QTL mapping and linhkage analyses in Cucumber

2.5 Plant defence signalling networks

2.5.1 Mitogen activated protein kinases

2.5.2 Calcium dependent protein kinases

2.5.3 Phospholipid signalling

2.5.4 Reactive oxygen species and nitric oxide

2.5.5 Salieylic acid and systemic acquired resistance

2.5.6 Jasmonic acid and ethylene

2.5.7 Cross talk between signalling pathways

2.6 Biochemistry of plant defence responses

2.6.1 Pathogenesis related proteins

2.6.2 Cell wall fortification

2.6.3 Lipoxygenases

2.6.4 Phytoalexins

2.6.5 Transcription factors

2.7 Reference

Chapter 3:SCAR Marker Linked to Powdery Mildew Resistance for Selection of Near-isogenc Lines in Cucumber.

3.1 Introduction

3.2 Materials and Methods

3.2.1 Plant materials

3.2.2 Disease resistance test

3.2.3 Marker analysis

3.2.4 Screening and markers verifying

3.2.5 Statistical analysis

3.2.6 Excision and cloning procedures

3.2.7 Selection of resistant NILs using SCAR markers

3.3 Resuits

3.3.1 Markers screening

3.3.2 SCAR designing and sequencing

3.3.3 Analysis of SCAR and resistance gene linkage

3.3.4 MAS in resistant NILs using SCAR markers

3.4 Discussion

3.5 Conelusion

3.6 References

Chapter 4:Mapping quantitative trait loci for powdery mildew resistance in cucumber using SRAP and ISSR markers.

4.1 Introduetion

4.2 Materials and Methods

4.2.1 Plant materials

4.2.2 Disease resistance test

4.2.3 DNAextraction and molecular marker analysis

4.2.4 QTL analysis

4.3 Resuits

4.3.1 Powdery mildew investigation

4.3.2 ISSR and SRAP markers analyses

4.3.3 Linkage map and marker segregation

4.3.4 QTL analysis

4.4 Discussion

4.5 Conclusion

4.6 References

Chapter 5:Expression of WRKY and MYB Genes during infection with powdery mildew in cucumber.

5.1 Introduction

5.2 Materials and Methods

5.2.1 Plant and fungal materials

5.2.2 RNA isolation and reverse transcription-PCR

5.2.3 Quantitative real-time PCR and gene expression analysis

5.3 Resuits

5.4 Discussion

5.5 Conclusion

5.6 References

6.Conclusion

7.Acknowledgement

Publications

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摘要

黄瓜(CucumissativusL.)(2n=14)是葫芦科重要成员之一,是世界上继番茄、白菜和洋葱之后的第四大被广泛种植的蔬菜作物,黄瓜在中国栽培十分普遍,经济效益较高。瓜类白粉病(Powderymildew,Sphaerothecafuliginea)是一种广泛发生的世界性病害,温室及露地均可发生。黄瓜白粉病是黄瓜生产上的三大病害之一,发病时不但降低植株的光合效能,同时影响植株产量和果实品质。因此白粉病抗性育种研究已经成为黄瓜育种的主要目标之一。本研究对黄瓜白粉病抗性遗传规律进行了分析并对相关QTL进行了初步定位,以期为黄瓜白粉病抗性育种提供指导。
   本研究以高感白粉病黄瓜品种D8和高抗白粉病黄瓜品种JIN5-508为材料,应用ISSR分子标记技术和BSA(混合群体分组分析法)法鉴定与黄瓜白粉病抗性基因连锁的分子标记;利用分子标记对14个高代回交系进行了鉴定;采用ISSR和SRAP方法构建黄瓜遗传连锁图谱,利用复合区间定位方法对白粉病抗性QTL进行了初步定位;应用RT-PCR方法鉴定与黄瓜白粉病抗性基因有关的转录基因(WRKY、MYB)表达。主要研究结果如下:
   1.以高感白粉病品种D8为母本和高抗白粉病品种JIN5-508为父本杂交得到F2(170株)群体以及经过六代回交得到的抗白粉病的14个高代回交系为材料,采用ISSR分子标记和BAS(混合群体分组分析法)法筛选到与黄瓜白粉病抗性连锁的分子标记UBC809,根据引物设计原则,将UBC809成功转换成SCAR标记,定名为S2F+S2R。同时利用该标记对14个高代回交系进行了鉴定,确定97*92-2高代回交系与轮回亲本D8构成近等基因系,为黄瓜白粉病抗性育种的分子标记辅助选择提供了科学的依据。
   2.应用ISSR和SRAP分子标记技术进行多态性筛选,以高感白粉病黄瓜品种D8和高抗白粉病黄瓜品种JIN5-508的188株F2单株作为作图群体,构建了含65个标记位点的遗传连锁图谱。整个图谱覆盖7个连锁群,全长831.6cM,标记平均间距为12.7cM,标记间最小遗传距离为4.8cM,最大遗传距离为22.3cM。采用复合区间定位分析,检测到控制黄瓜白粉病抗性的QTL位点2个,都位于第3连锁群上,贡献率为7.6%和13.5%。
   3.以高感白粉病黄瓜品种D8和高抗白粉病黄瓜品种JIN5-508为材料,采用RT-PCR法研究接种白粉菌后三个转录基因(WRKY30、WRKY6和MYB)的表达变化规律。高感品种D8中WRKY30、WRKY6和MYB对白粉病菌侵染的应答早于JIN5-508,在D8中的快速表达时间分别为8h,8h和4h小时,而在高抗JIN5-508中的快速表达时间分别为16h,72h和16h。这一结果表明,感病品种D8必须尽早启动相关基因的表达才能维持生长和增强白粉病抗性。

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