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Three-dimensional volume analysis of v asculature in engineered tissues

机译:工程组织中血管的三维体积分析

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摘要

Three-dimensional textural and volumetric image analysis holds great potential in understanding the image data produced by multi-photon microscopy. In this paper, an algorithm that quantitatively analyzes the texture and the morphology of vasculature in engineered tissues is proposed. The investigated 3D artificial tissues consist of Human Umbilical Vein Endothelial Cells (HUVEC) embedded in collagen exposed to two regimes of ultrasound standing wave fields under different pressure conditions. Textural features were evaluated using the normalized Gray-Scale Cooccurrence Matrix (GLCM) combined with Gray-Level Run Length Matrix (GLRLM) analysis. To minimize error resulting from any possible volume rotation and to provide a comprehensive textural analysis, an averaged version of nine GLCM and GLRLM orientations is used. To evaluate volumetric features, an automatic threshold using the gray level mean value is utilized. Results show that our analysis is able to differentiate among the exposed samples, due to morphological changes induced by the standing wave fields. Furthermore, we demonstrate that providing more textural parameters than what is currently being reported in the literature, enhances the quantitative understanding of the heterogeneity of artificial tissues.
机译:三维纹理和体积图像分析在理解多光子显微镜产生的图像数据方面具有巨大潜力。本文提出了一种定量分析工程组织脉管结构和形态的算法。被研究的3D人工组织由嵌入胶原蛋白中的人脐静脉内皮细胞(HUVEC)组成,胶原蛋白在不同压力条件下暴露于两种超声驻波场。使用归一化的灰度共生矩阵(GLCM)与灰度游程长度矩阵(GLRLM)分析相结合来评估纹理特征。为了最小化任何可能的体积旋转导致的误差并提供全面的纹理分析,我们使用九种GLCM和GLRLM方向的平均版本。为了评估体积特征,使用了使用灰度平均值的自动阈值。结果表明,由于驻波场引起的形态变化,我们的分析能够区分暴露的样品。此外,我们证明,提供比当前文献中报道的更多的纹理参数,可增强对人工组织异质性的定量理解。

著录项

  • 来源
    《Visualization and data analysis 2013》|2013年|86540C.1-86540C.11|共11页
  • 会议地点 Burlingame CA(US)
  • 作者单位

    Department of Electrical and Microelectronic Engineering, Rochester Institute of Technology,Rochester, NY 14623 USA;

    Biomedical Engineering Department, University of Rochester, Rochester, NY 14627 USA;

    Biomedical Engineering Department, University of Rochester, Rochester, NY 14627 USA;

    Department of Electrical and Microelectronic Engineering, Rochester Institute of Technology,Rochester, NY 14623 USA,Chester F. Carlson Center for Imaging Science, Rochester Institute of Technology, Rochester, NY 14623 USA;

    Chester F. Carlson Center for Imaging Science, Rochester Institute of Technology, Rochester, NY 14623 USA;

  • 会议组织
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Volume quantification; 3D-textural analysis; Multi-photon microscope; Engineered tissues;

    机译:体积定量; 3D纹理分析;多光子显微镜工程纸巾;

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