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A fast and effective reconstruction method for fluorescence molecular tomography based on sparsity adaptive subspace pursuit

机译:基于稀疏自适应子空间追踪的荧光分子层析成像快速有效重建方法

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摘要

Fluorescence molecular tomography (FMT), which is a promising tomographic method for in vivo small animal imaging, has many successful applications. However, FMT reconstruction is usually an ill-posed problem because only the photon distribution over the body surface is measurable. The Lp-norm regularization is generally adopted to stabilize the solution, which can be regarded as a type of a priori information of the fluorescent probe bio-distribution. When FMT is used for the early detection of tumors, an important feature is the sparsity of the fluorescent sources because tumors are usually very small and sparse at early stage. Considering this, we propose a fast and effective method with L1-norm based on sparsity adaptive subspace pursuit to solve the FMT problem in this paper. Our proposed method treats FMT problem with sparsity-promoting L1-norm as the basis pursuit problem. At each iteration, a sparsity factor that indicates the number of unknowns is estimated and updated adaptively. Then our method seeks a small index set which indicates atoms exhibiting highest correlation with the current residual, and updates the current supporting set by merging the newly selected index set. It can be regarded as a kind of sparse approximation reconstruction strategy. To evaluate our proposed method, we compare it to the iterated-shrinkage-based method with L1-norm regularization in numerical experiments. The results demonstrate that the proposed algorithm is able to obtain satisfactory reconstruction results. In addition, the proposed method is about two orders of magnitude faster compared to the iterated-shrinkage-based method. Our method is a practical and effective FMT reconstruction method.
机译:荧光分子层析成像(FMT)是一种用于体内小动物成像的有前途的层析成像方法,具有许多成功的应用。但是,FMT重建通常是一个不适定的问题,因为只能测量身体表面上的光子分布。通常采用Lp范数正则化来稳定溶液,可以将其视为荧光探针生物分布的先验信息的一种。当FMT用于肿瘤的早期检测时,一个重要的特征是荧光源的稀疏性,因为肿瘤通常非常小且在早期阶段稀疏。考虑到这一点,本文提出了一种基于稀疏自适应子空间跟踪的L1-范数快速有效的方法来解决FMT问题。我们提出的方法将稀疏性提升L1范数作为基本追求问题来对待FMT问题。在每个迭代中,指示未知数的稀疏因子被自适应地估计和更新。然后我们的方法寻求一个小的索引集,该索引集指示与当前残差表现出最高相关性的原子,并通过合并新选择的索引集来更新当前支持集。它可以看作是一种稀疏的近似重构策略。为了评估我们提出的方法,我们在数值实验中将其与基于L1范数正则化的基于迭代收缩的方法进行了比较。结果表明,该算法能够获得满意的重构结果。此外,与基于迭代收缩的方法相比,所提出的方法要快两个数量级。我们的方法是一种实用有效的FMT重建方法。

著录项

  • 来源
    《Multimodal biomedical imaging IX》|2014年|89370N.1-89370N.7|共7页
  • 会议地点 San Francisco CA(US)
  • 作者单位

    Key Laboratory of Molecular Imaging of Chinese Academy of Sciences, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China;

    Key Laboratory of Molecular Imaging of Chinese Academy of Sciences, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China;

    Beijing Jiaotong University, School of Computer and Information Technology, Department of Biomedical Engineering, Beijing 100044, China;

    Beijing Jiaotong University, School of Computer and Information Technology, Department of Biomedical Engineering, Beijing 100044, China;

    Northeastern University, Sino-Dutch Biomedical and Information Engineering School, Shenyang, Liaoning 110819, China;

    Key Laboratory of Molecular Imaging of Chinese Academy of Sciences, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China;

    Key Laboratory of Molecular Imaging of Chinese Academy of Sciences, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China;

  • 会议组织
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Fluorescence molecular tomography (FMT); reconstruction method; sparsity adaptive subspace pursuit;

    机译:荧光分子层析成像(FMT);重建方法稀疏自适应子空间追求;

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