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Texture Analysis of Thoracic CT to Predict Hyperpolarized Gas MRI Lung Function

机译:胸段CT的纹理分析预测超极化气体MRI肺功能

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Objective: Hyperpolarized noble gas magnetic resonance imaging (MRI) provides valuable insights on lung function, andyet is not widely available, whereas thoracic x-ray computed tomography (CT) protocols are nearly universally accessible.Our aim was to develop a texture analysis pipeline to train and test machine learning classifiers, predicting MRI-basedventilation metrics from single-volume thoracic CT in patients with chronic obstructive pulmonary disease (COPD).Methods: MR ventilation maps were generated and registered to thoracic CT datasets. Images were segmented intovolumes of interest (15x15x15mm), resulting in approximately 6,000 volumes-of-interest per subject participant. 85 firstorderand texture features were calculated to describe each volume, including a new texture feature based on the size andoccurrence of CT clusters (we called the cluster volume matrix), which is similar to run-length-matrix. A LogisticRegression, Linear Support Vector Machine and Quadratic Support Vector Machine were trained using 5-fold crossvalidationon a cohort of seven subjects. The highest performing classification model was then applied to a test cohort ofthree subjects.Results: There was qualitative spatial agreement for the experimental MRI ventilation maps and the CT-predictedfunctional maps. The training set was classified with 71% accuracy, while the test set was classified with 66% accuracyand area under the curve (AUC) = 0.72.Conclusions: This proof-of-concept study demonstrated feasibility in a small group of patients with moderateclassification accuracy. Novel insights will be used to optimize this approach with future application to a largerheterogeneous patient cohort.
机译:目的:超极化的贵族气体磁共振成像(MRI)为肺功能提供有价值的见解,然而,没有广泛的可用性,而胸X射线计算断层扫描(CT)协议几乎普遍访问。我们的目的是开发一种纹理分析管道来训练和测试机器学习分类器,预测基于MRI的慢性阻塞性肺病(COPD)患者单批胸CT的通风指标。方法:生成先生通风地图并注册到胸段CT数据集。图像被分段为兴趣的卷(15x15x15mm),每个主题参与者导致约6,000卷的兴趣。 85第一令计算纹理特征以描述每个卷,包括基于大小和的新纹理功能CT集群(我们称为群集卷矩阵)的发生,类似于运行长度矩阵。一个物流回归,线性支持向量机和二次支持向量机使用5倍交叉验证培训关于七个科目的队列。然后将最高执行的分类模型应用于测试队列三个科目。结果:实验MRI通风地图和CT预测有定性空间协议功能图。培训集按71%的准确性归类,而测试集均按66%的准确度进行分类和曲线下的区域(AUC)= 0.72。结论:这种概念证明研究证明了一小组中等患者的可行性分类准确性。新颖的见解将用于优化这种方法,将来应用于更大的应用程序异质患者队列。

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