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Texture Analysis of Thoracic CT to Predict Hyperpolarized Gas MRI Lung Function

机译:胸部CT的纹理分析预测超极化气体MRI肺功能

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Objective: Hyperpolarized noble gas magnetic resonance imaging (MRI) provides valuable insights on lung function, andyet is not widely available, whereas thoracic x-ray computed tomography (CT) protocols are nearly universally accessible.Our aim was to develop a texture analysis pipeline to train and test machine learning classifiers, predicting MRI-basedventilation metrics from single-volume thoracic CT in patients with chronic obstructive pulmonary disease (COPD).Methods: MR ventilation maps were generated and registered to thoracic CT datasets. Images were segmented intovolumes of interest (15x15x15mm), resulting in approximately 6,000 volumes-of-interest per subject participant. 85 firstorderand texture features were calculated to describe each volume, including a new texture feature based on the size andoccurrence of CT clusters (we called the cluster volume matrix), which is similar to run-length-matrix. A LogisticRegression, Linear Support Vector Machine and Quadratic Support Vector Machine were trained using 5-fold crossvalidationon a cohort of seven subjects. The highest performing classification model was then applied to a test cohort ofthree subjects.Results: There was qualitative spatial agreement for the experimental MRI ventilation maps and the CT-predictedfunctional maps. The training set was classified with 71% accuracy, while the test set was classified with 66% accuracyand area under the curve (AUC) = 0.72.Conclusions: This proof-of-concept study demonstrated feasibility in a small group of patients with moderateclassification accuracy. Novel insights will be used to optimize this approach with future application to a largerheterogeneous patient cohort.
机译:目的:超极化惰性气体磁共振成像(MRI)提供了关于肺功能的宝贵见解,并且 胸片X线计算机断层扫描(CT)协议几乎可以普遍使用。 我们的目标是开发一条纹理分析管道来训练和测试机器学习分类器,预测基于MRI的 慢性阻塞性肺疾病(COPD)患者单剂量胸部CT的通气指标。 方法:生成MR通气图并将其注册到胸部CT数据集。图像被分割成 体积(15x15x15mm),每个参与者的兴趣量大约为6,000。 85一阶 计算纹理特征以描述每个体积,包括基于大小和尺寸的新纹理特征 CT簇(我们称为簇体积矩阵)的出现,类似于游程长度矩阵。物流 使用5倍交叉验证对回归,线性支持向量机和二次支持向量机进行了训练 在七个主题的队列中。然后,将效果最好的分类模型应用于 三个科目。 结果:实验性MRI通气图和CT预测的图像在质量上存在空间一致性 功能图。训练集的分类精度为71%,而测试集的分类精度为66% 曲线下面积(AUC)= 0.72。 结论:这项概念验证研究证明了在少数中度患者中的可行性 分类准确性。新颖的见解将用于优化此方法,并在将来更大范围地应用 异类患者队列。

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