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Computationally derived cytological image markers for predicting risk of relapse in acute myeloid leukemia patients following bone marrow transplantation

机译:计算源自骨髓移植后急性髓性白血病患者复发风险的细胞学图像标志物

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Allogenic hematopoietic stem cell transplant (HCT) is a curative therapy for acute myeloid leukemia (AML).Relapse after HCT is the most common cause of treatment failure and is associated with poor prognosis. Earlyidentification of which patients are at elevated risk of relapse may justify use of aggressive post-HCT treatmentoptions, potentially preventing relapse and treatment failure. In this study, our goal was to predict relapseafter HCT in AML patients using quantitative features extracted from digitized Wright-Giemsa stained post-transplant aspirate smears. We collected 39 aspirate specimens from a cohort of 39 AML patients after HCT,of which 25 experienced relapse, while 14 did not. Our approach comprised the following main steps. First, adeep learning model was developed to segment myeloblasts, a cell type in bone marrow that accumulates andcharacterizes AML. A total of 161 texture and shape descriptors were then extracted from these segmentedmyeloblasts. The top eight predictive features were identi ed using a Wilcoxon rank sum test over 100 iterationsof 3-fold cross validation. A model was subsequently built employing these features and yielded an average areaunder the receiver operating characteristic curve of 0.80 0:05 in cross validation. The top eight features includefour Haralick texture features and four fractal dimension features. The texture features appear to characterizechromatin patterns in myeloblasts while the fractal features quantify morphological irregularity and complexityof myeloblasts, in alignment with ndings previously reported for AML patients post-treatment.
机译:同种异体造血干细胞移植(HCT)是急性髓性白血病(AML)的治疗方法。HCT后复发是治疗失败的最常见原因,并且与预后差有关。早期的鉴定哪些患者处于升高的复发风险可能是合理使用侵略性后宫治疗方法选项,可能预防复发和治疗失败。在这项研究中,我们的目标是预测复发在AML患者中使用从数字化赖特-Giemsa染成的数字化特征的定量特征后 - 移植抽吸涂片。我们在HCT后从39例AML患者的队列中收集了39个吸气标本,其中25次经验丰富的复发,而14则没有。我们的方法包括以下主要步骤。首先,A.深入学习模型开发给骨髓细胞分段,骨髓中的细胞类型积聚和表征AML。然后从这些分段中提取总共161个纹理和形状描述符骨髓细胞。前八个预测功能使用100次迭代的Wilcoxon等级测试标识3倍交叉验证。随后建立了采用这些功能的模型,并产生了平均区域在接收器下,在交叉验证中操作特征曲线0.80 0:05。前八个功能包括四个haralick纹理功能和四个分形尺寸特征。纹理特征似乎是表征染色体在骨髓细胞中的模式,而分形特征量化形态不规则性和复杂性骨髓细胞与先前报道的乳腺术治疗后的乳腺化合物。

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