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Skin cancer texture analysis of OCT images based on Haralick, fractal dimension and the complex directional field features

机译:基于Haralick,分形尺寸和复杂定向场特征的OCT图像皮肤癌纹理分析

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Optical coherence tomography (OCT) is usually employed for the measurement of tumor topology, which reflects structural changes of a tissue. We investigated the possibility of OCT in detecting changes using a computer texture analysis method based on Haralick texture features, fractal dimension and the complex directional field method from different tissues. These features were used to identify special spatial characteristics, which differ healthy tissue from various skin cancers in cross-section OCT images (B-scans). Speckle reduction is an important pre-processing stage for OCT image processing. In this paper, an interval type-II fuzzy anisotropic diffusion algorithm for speckle noise reduction in OCT images was used. The Haralick texture feature set includes contrast, correlation, energy, and homogeneity evaluated in different directions. A box-counting method is applied to compute fractal dimension of investigated tissues. Additionally, we used the complex directional field calculated by the local gradient methodology to increase of the assessment quality of the diagnosis method. The complex directional field (as well as the "classical" directional field) can help describe an image as set of directions. Considering to a fact that malignant tissue grows anisotropically, some principal grooves may be observed on dermoscopic images, which mean possible existence of principal directions on OCT images. Our results suggest that described texture features may provide useful information to differentiate pathological from healthy patients. The problem of recognition melanoma from nevi is decided in this work due to the big quantity of experimental data (143 OCT-images include tumors as Basal Cell Carcinoma (BCC), Malignant Melanoma (MM) and Nevi). We have sensitivity about 90% and specificity about 85%. Further research is warranted to determine how this approach may be used to select the regions of interest automatically.
机译:光学相干断层扫描(OCT)通常用于测量肿瘤拓扑,这反映了组织的结构变化。我们调查了OCT在使用基于Haralick纹理特征,分形维数和来自不同组织的复杂定向场方法的计算机纹理分析方法检测变化的可能性。这些特征用于识别特殊的空间特征,其在横截面OCT图像(B扫描)中不同于各种皮肤癌的健康组织。散斑减少是OCT图像处理的重要预处理阶段。本文使用了OCT图像的斑点噪声减少的间隔Type-II模糊各向异性扩散算法。 haralick纹理特征集包括在不同方向上评估的对比度,相关性,能量和均匀性。盒计数方法应用于计算研究组织的分形维数。另外,我们使用了局部梯度方法计算的复杂方向场,从而增加了诊断方法的评估质量。复杂的方向场(以及“经典”定向场)可以帮助描述图像作为一组方向。考虑到恶性组织各向异性地生长的事实,可以在皮色图像上观察到一些主凹槽,这意味着在OCT图像上的主路径的存在。我们的结果表明,所描述的纹理特征可以提供鉴定来自健康患者的病理学的有用信息。由于大量的实验数据(143个OCT图像包括基底细胞癌(BCC),恶性黑素瘤(MM)和NEVI),在这项工作中决定了来自Nevi的识别黑素瘤的问题。我们的敏感性约为90%,特异性约为85%。有必要进一步研究,以确定如何使用这种方法来自动选择利息区域。

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