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A Parallel Multi-Core Team of Multiobjective Evolutionary Algorithms to Discover DNA Motifs

机译:一个不同的多核心群体的多层进化算法,以发现DNA主题

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This paper proposes the use of a parallel multi-core team to exploit the characteristics of several algorithms, when solving one of the best known biological problems, the Motif Discovery Problem (MDP). Often, when we solve an optimization problem, we have to tackle very different scenarios. This complicates finding a single technique or algorithm that will be able to solve all of them adequately. One possible solution to this problem is to combine different algorithms in a team that allows us to solve all scenarios. A parallel methodology is designed in this work, which combines the operation of four multiobjective evolutionary algorithms by using OpenMP to solve different motif discovery scenarios. Our conclusions show that our parallel multi-core team is quite flexible and accurate for this application, and an important tool for discovering relevant DNA motifs.
机译:本文建议使用并行多核团队利用几种算法的特征,当解决最着名的生物问题之一,主题发现问题(MDP)。通常,当我们解决优化问题时,我们必须解决非常不同的场景。这使得找到一种能够充分解决所有技术或算法的单一技术或算法。对此问题的一个可能解决方案是将不同的算法组合在允许我们解决所有方案的团队中。在这项工作中设计了一种并行方法,它通过使用OpenMP来解决不同的主题发现场景来结合四个多目标进化算法的操作。我们的结论表明,我们的并联多核团队对本申请非常灵活,准确,以及用于发现相关的DNA主题的重要工具。

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