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Flexing of DNA on the nucleosome core particle

机译:在核心核心粒子上屈曲DNA

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The fluorescence anisotropy of ethidium bromide intercalated into the 146 base pairs of DNA on the nucleosome decays due to a combination of rotational diffusion and torsional flexing motions of the DNA. We characterize the internal flexing motions of the DNA by fitting the anisotropy to a mathematical model proposed by Schurr through the variation of two parameters: a torsional coefficient and a frictional coefficient. Using data collected 5°C and 20°C in water, and at 5°C in D{sub}2O, and assuming a model of 146 base pairs clamped at both ends, we have in all cases obtained frictional and torsional coefficients that are higher than the values reported by others.
机译:由于旋转扩散和DNA扭转弯曲运动的组合,溴化乙锭的荧光各向异性嵌入到核小体上的146碱基对DNA上。通过将各向异性拟合到Schurr通过两个参数的变化来表征DNA的内部屈曲运动,通过两个参数的变化:扭转系数和摩擦系数。在水中收集5°C和20°C的数据,在D {Sub} 2O中,在5°C中,并假设在两端夹紧的146个碱基对的型号,我们在所有情况下都获得了摩擦和扭转系数高于其他人报告的值。

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