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Seeded Watersheds for Combined Segmentation and Tracking of Cells

机译:种子流域用于组合细胞的分割和跟踪

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Watersheds are very powerful for image segmentation, and seeded watersheds have shown to be useful for object detection in images of cells in vitro. This paper shows that if cells are imaged over time, segmentation results from a previous time frame can be used as seeds for watershed segmentation of the current time frame. The seeds from the previous frame are combined with morphological seeds from the current frame, and over-segmentation is reduced by rule-based merging, propa-gating labels from one time-frame to the next. Thus, watershed segmentation is used for segmentation as well as tracking of cells over time. The described algorithm was tested on neural stem/progenitor cells imaged using time-lapse microscopy. Tracking results agreed to 71% to manual tracking results. The results were also compared to tracking based on solving the assignment problem using a modified version of the auction algorithm.
机译:流域对于图像分割非常强大,种子流域已显示用于体外细胞图像中的对象检测。本文表明,如果通过时间内成像电池,则来自先前时间帧的分段结果可以用作当前时间帧的流域分段的种子。来自前帧的种子与来自当前帧的形态种子组合,通过基于规则的合并,从一个时间框架到下一个时间帧来减少过分分割。因此,流域分割用于分段以及随时间的电池跟踪。在使用延时显微镜的神经茎/祖细胞上测试所描述的算法。跟踪结果同意71%到手动跟踪结果。还将结果与基于使用拍卖算法的修改版本解决分配问题的跟踪进行了比较。

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