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Neutral search spaces for artificial evolution: a lesson from life

机译:中性搜索空间用于人工演进:生命中的一课

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Natural evolutionary systems exhibit a complex mapping from genotype to phenotype. One property of these mappings is neutrality, where many mutations do not have an appreciable effect on the phenotype. In this case the mapping from genotype to phenotype contains redundancy such that a phenotype is represented by many genotypes. Studies of RNA and protein molecules, the fundamental building blocks of life, reveal that this can result in neutral networks - sets of genotypes connected by single point mutations that map into the same phenotype. This allows genetic changes to be made while maintaining the current phenotype and htus may reduce the chance of becoming trapped in sub-optimal regions of genotyep space. In this paper we present several redundant mappings and explore their properties by performing random walks on the neutral networks in their genotype spaces. We investigate whether the properties found in nature's search space can be engineered into our artificial evolutionary systems. A mapping based on a random boolean network was found to give particularly promising results.
机译:自然进化系统表现出从基因型到表型的复杂映射。这些映射的一个属性是中立的,许多突变对表型没有明显的影响。在这种情况下,从基因型到表型的映射含有冗余,使得表型由许多基因型表示。 RNA和蛋白质分子的研究,基本构建的生命障碍,揭示这可以导致中性网络 - 通过映射成相同表型的单点突变连接的基因型。这允许在保持当前表型和HTU的同时进行遗传变化,可以减少陷入基因次空间的次优区域的可能性。在本文中,我们通过在其基因型空间中执行随机行走,展示了几种冗余映射并探索其性质。我们调查自然搜索空间中的属性是否可以设计成我们的人工进化系统。发现了基于随机布尔网络的映射,给出了特别有希望的结果。

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