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Implementation of CCNUGrid-Based Drug Virtual Screening Applications Using Workflow Techniques

机译:使用工作流技术实现基于CCNUGrid的药物虚拟筛选应用程序

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Grid-based virtual screening of new potential potent inhibitors has been able to be performed on Center China Normal University Grid (CCNUGrid), by joint of using workflow techniques and Dock 5.0 parallel program packages. The present grid middleware is designed by using Web services technologies and standards, which provides supports for authorization, workflow, security, quality of service aspects. In this work, one of the applications, the structure-based rational quest for potential novel inhibitors of human HMG-CoA reductase by virtual screening, is described. It includes a set of complete chain of tools necessary for entire process from defining an effective pharmacophore to finding more active hit compounds with pharmaceutical activation and visualization technology. The present workflow environment is utilized to implement the application for parameter setting, interactive tools, virtual screening from database and result visualization etc. It is concluded that the present workflow provides benefits to flexibility, reusability and scalability and is a more effective and convenient tools to grid-based virtual screening
机译:通过使用工作流技术和Dock 5.0并行程序包,可以在华中师范大学网格(CCNUGrid)上对新的潜在有效抑制剂进行基于网格的虚拟筛选。当前的网格中间件是通过使用Web服务技术和标准设计的,该技术和标准提供了对授权,工作流,安全性和服务质量方面的支持。在这项工作中,描述了一种应用,即通过虚拟筛选对人HMG-CoA还原酶的潜在新型抑制剂进行基于结构的合理探索。它包括一套完整的工具链,这些工具是整个过程所必需的,从定义一个有效的药效基团到使用药物激活和可视化技术发现更具活性的命中化合物。利用当前的工作流环境来实现参数设置,交互工具,从数据库进行虚拟筛选和结果可视化等应用程序。结论是,当前的工作流为灵活性,可重用性和可伸缩性提供了好处,是一种更有效,更方便的工具。基于网格的虚拟筛选

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