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AN ADAPTIVE LABORATORY EVOLUTION PLATFORM FOR STRAIN CONSTRUCTION AND ENGINEERING PARTS

机译:应变构造和工程零件的自适应实验室演化平台

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Adaptive Laboratory Evolution (ALE) can be used to obtain useful strains for biotechnology applications. A complete platform containing automation, bioinformatics, and biological selection systems can be used to replace the design and build steps in the rational strain engineering process. In this talk, I will describe the different parts of this platform and current use cases applying the platform to strain construction goals. Examples of advanced biological selection systems which have been developed will be highlighted to show how ALE can be used to obtain production strains for a wider set of products and for focusing selective pressures on targeted enzymatic steps. An additional specific focus will be to highlight what a quality-controlled mutation identification pipeline, a mutation database, and higher order interpretations of mutations using biological network analyses provides for such engineering goals. Finally, I will review what is learned with increasing scale from gathering mutation and strain data from ALE experimentation and what it means for synthetic biology.
机译:自适应实验室进化(ALE)可用于获得生物技术应用中有用的菌株。包含自动化,生物信息学和生物选择系统的完整平台可用于替代合理的菌株工程过程中的设计和构建步骤。在本次演讲中,我将描述该平台的不同部分以及将平台应用于构建目标的当前用例。将重点介绍已开发的先进生物选择系统的示例,以显示ALE如何可用于获得用于更广泛的产品集的生产菌株,以及如何将选择性压力集中在目标酶促步骤上。另一个特定的重点将是突出显示质量控制的突变鉴定管道,突变数据库以及使用生物网络分析对突变进行的更高阶解释为此类工程目标提供了什么。最后,我将回顾从ALE实验中收集突变和品系数据所获得的经验,以及这对合成生物学的意义。

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