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Data Sharing Model for Sequence Alignment to Reduce Database Retrieve

机译:序列对齐数据共享模型,以减少数据库检索

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Many programs of bioinformatics provide biochemists and biologists retrieve and analysis services of gene and protein databases. These services access databases for each arrival of user's request, which takes a long time, increases server's overload and response time. In this paper, two data sharing models are presented to reduce database retrieve for sequence alignments. (1) Grouping model is proposed to share database access between many requests arrived in a certain period of time by utilizing database access patterns in bioinformatics. (2) Carpool model is also proposed to reduce response time as well as to increase system throughput by servicing new arriving request immediately together with the previous on going requests to share database accesses without waiting time. Simulation results show that two data sharing models can reduce the number of database access by sharing it among many requests and increase system throughput.
机译:许多生物信息学程序为基因和蛋白质数据库提供生化主义者和生物学家检索和分析服务。这些服务访问数据库的用户请求的每次到达,需要很长时间,增加了服务器的过载和响应时间。在本文中,提出了两个数据共享模型以减少序列对齐的数据库检索。 (1)通过利用生物信息学中的数据库访问模式在一定时间内到达的许多请求之间的数据库访问,提出分组模型。 (2)Carpool模型也被提出减少响应时间,并通过立即提供新的到达请求,以便在未等待时间共享数据库访问的前提请求,提高系统吞吐量。仿真结果表明,两个数据共享模型可以通过在许多请求中共享数据库访问数量并提高系统吞吐量。

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