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Parallel Algorithms for the Computation of Cycles in Relative Neighborhood Graphs

机译:相对邻域图中的循环计算的并行算法

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We present parallel algorithms for computing cycle orders and cycle perimeters in relative neighborhood graphs. This parallel algorithm has wide-ranging applications from microscopic to macroscopic domains, e.g., in histopathological image analysis and wireless network routing. Our algorithm consists of the following steps (sub-algorithms): (1) Uniform partitioning of the graph vertices across processes, (2) Parallel Delaunay triangulation and (3) Parallel computation of the relative neighborhood graph and the cycle orders and perimeters. We evaluated our algorithm on a large dataset with 6.5 Million points and demonstrate excellent fixed-size scalability. We also demonstrate excellent isogranular scalability up to 131K processes. Our largest run was on a dataset with 13 billion points on 131K processes on ORNL's Cray XK7 "Titan" supercomputer.
机译:我们在相对邻域图中呈现用于计算周期订单的并行算法和循环周边。该并行算法具有从显微镜到宏观域,例如组织病理学图像分析和无线网络路由的宽范围的应用。我们的算法包括以下步骤(子算法):(1)跨越过程的均匀划分曲线图形顶点,(2)并行删除三角测量和(3)相对邻域图和周期订单和周边的并行计算。我们在具有650万分的大型数据集中评估了我们的算法,并展示了出色的固定尺寸可扩展性。我们还展示了优异的甲状运动可扩展性,最高可达131K的过程。我们最大的运行是在Arnl Cray XK7“Titan”超级计算机上的131K进程上有131亿点的数据集。

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