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Predicting bacterial functional traits from whole genome sequences using random forest

机译:使用随机森林从全基因组序列预测细菌功能性状

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Microbes are the most abundant and diverse biota on earth. Despite their small size, they have a huge impact in many essential ecosystem services and overall global health. However, due to the complexity of microbial communities and the fact that most of the members cannot be cultured, the molecular and ecological details as well as influencing factors of these processes are still poorly understood [1]. An important question in ecological biology is how biodiversity influences ecosystem functioning [2]. In general, it is thought that biodiversity maximizes potential either through greater chances of containing highly successful individuals and/or poorly understood processes that benefit communities [3]–[5]. Underlying this is the relationship between the presence of individual organism and specific functional traits.
机译:微生物是地球上最丰富多样的生物群系。尽管规模很小,但它们对许多重要的生态系统服务和整体全球健康具有巨大影响。但是,由于微生物群落的复杂性以及大多数成员无法培养的事实,这些过程的分子和生态学细节以及影响因素仍然知之甚少[1]。生态生物学中的一个重要问题是生物多样性如何影响生态系统的功能[2]。总的来说,人们认为,生物多样性可以通过更大的机会遏制高度成功的个体和/或对社区有益的不充分的过程来最大程度地发挥潜力[3]-[5]。这是个体生物的存在与特定功能性状之间的关系的基础。

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