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Sparse representation-based gene selection for cancer prediction

机译:基于稀疏表示的基因选择用于癌症预测

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Gene selection is applied to reduce the number of genes in many applications where gene expression has a high dimension. Existing gene selection methods focus on finding relevant genes, but they often ignore the redundancy among the genes. A novel framework is presented which integrates the removal of feature irrelevance and detection of feature redundancy. The proposed framework firstly removes the irrelevant genes based on the popular gene selection methods (e.g., information gain). And a sparse representation model is designed for the left genes, which aims at removing the redundant genes. Finally cancer prediction is done based on the selected gene space with the classification algorithms. A series of experiments on real data sets have shown that the proposed framework outperforms the existing typical gene selection methods.
机译:在基因表达具有高维的许多应用中,应用基因选择来减少基因的数量。现有的基因选择方法着重于寻找相关基因,但是它们经常忽略基因之间的冗余。提出了一种新颖的框架,该框架集成了特征无关性的消除和特征冗余的检测。提出的框架首先基于流行的基因选择方法(例如,信息获取)去除不相关的基因。针对剩余的基因设计了稀疏表示模型,旨在去除多余的基因。最后,使用分类算法根据所选的基因空间进行癌症预测。在真实数据集上进行的一系列实验表明,提出的框架优于现有的典型基因选择方法。

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