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Proton Pumping P Systems

机译:质子泵P系统

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We propose here a (biologically inspired) model of P system called proton pumping P system that is a special case of evolution-communication P system. In cell biology there are transport mechanisms, involving protons. We generalize this idea by considering a few different types of protons. A proton pumping P system is, essentially, an evolution-communication P system where a special subset of symbol-objects (called protons) is used. In such a system we have simple evolution rules (classical evolution rules without target indications), symport and antiport rules that exchange some objects (among them, possibly, other protons) for a proton; taking inspiration from biology, this particular type of antiports is often called proton pumping rules. We show that, as expected, the new model is universal, using non-cooperative rules, symport and antiport rules of weight one, and enough types of protons available for the computation. If we decrease the number of types of protons to one or two, then the model is at least as powerful as ET0L system, provided that (total) weak or strong priority of antiport rules over symport and evolution rules are used. Finally, we consider some descriptional complexity measures (again, inspired from biology) for the newly introduced model.
机译:我们在此提出一种称为P质子泵浦P系统的(生物学启发的)P系统模型,这是进化-交流P系统的特例。在细胞生物学中,存在转运机制,涉及质子。我们通过考虑几种不同类型的质子来概括这个想法。质子泵送P系统本质上是一种演化通信P系统,其中使用了特殊的符号对象子集(称为质子)。在这样的系统中,我们有简单的进化规则(没有目标指示的经典进化规则),同质和反形态规则,这些规则将某些物体(其中可能还有其他质子)交换为质子。从生物学中汲取灵感,这种特殊类型的反端口通常称为质子泵浦规则。我们证明,正如预期的那样,新模型具有通用性,它使用了非合作规则,权重为1的同向和反向规则以及可用于计算的足够量的质子。如果我们将质子类型的数量减少到一或两种,则该模型至少与ET0L系统一样强大,只要使用(共)优先顺序上的对位规则和进化规则来确定反端口规则的弱或强优先级即可。最后,我们考虑了新引入模型的一些描述性复杂性度量(同样,是受生物学启发)。

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