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Overview of the Regulatory Network of Plant Seed Development (SeeDev) Task at the BioNLP Shared Task 2016

机译:2016年Bionlp共享任务的植物种子开发监管网络监管网络概述

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This paper presents the SeeDev Task of the BioNLP Shared Task 2016. The purpose of the SeeDev Task is the extraction from scientific articles of the descriptions of genetic and molecular mechanisms involved in seed development of the model plant, Arabidopsis thaliana. The SeeDev task consists in the extraction of many different event types that involve a wide range of entity types so that they accurately reflect the complexity of the biological mechanisms. The corpus is composed of paragraphs selected from the full-texts of relevant scientific articles. In this paper, we describe the organization of the SeeDev task, the corpus characteristics, and the metrics used for the evaluation of participant systems. We analyze and discuss the final results of the seven participant systems to the test. The best F-score is 0.432, which is similar to the scores achieved in similar tasks on molecular biology.
机译:本文介绍了二氧化碳分享任务的成种任务。Seedev任务的目的是从科学文章提取遗传和分子机制的描述,参与模型植物的种子发展,拟南芥拟南芥。 SEEDEV任务在于提取许多不同的事件类型,其涉及各种实体类型,以便精确地反映生物机制的复杂性。语料库由选自相关科学文章的全文中的段落组成。在本文中,我们描述了SEEDEV任务,语料库特性和用于评估参与者系统的指标的组织。我们分析并讨论了七个参与者系统的最终结果。最好的F分数是0.432,类似于在分子生物学上的类似任务中实现的分数。

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