首页> 外文会议>The 3rd International Conference on Bioinformatics and Biomedical Engineering(iCBBE 2009)(第三届生物信息与生物医学工程国际会议)论文集 >Detection of Differentially Expressed Genes in Cultured Epidermal Stem Cells Derived From Children and Adult Skins by cDNA Microarray Technique
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Detection of Differentially Expressed Genes in Cultured Epidermal Stem Cells Derived From Children and Adult Skins by cDNA Microarray Technique

机译:利用cDNA芯片技术检测儿童和成人皮肤衍生的表皮干细胞中差异表达的基因

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Epidermal stem cells have the characteristic of the undifferentiated cells in the morphology, and are the biological source of the skin and its subsidiary in the development, repair and reconstruction. The proliferation and differentiation of epidermal stem cell are influenced by many factors, such as integrin, signal transduction pathway and cytokines. Current researches have not yet been able to find absolute recognized epidermal stem cells markers. And on certain characteristics of a single gene expression and its impact studies have made some progress, but the overall characteristics and gene expression changes and developments in the law was unclear. This research detected differentially expressed genes in cultured epidermal stem cells derived from children and adult skins. Samples were derived from 4-12Y children and 35-55Y adult skin. The human epidermal stem cells were isolated by trypsin digesting method and purified by collagen adhering method, respectively. Total RNA extracted from epidermal stem cells of two samples. Differentially expressed genes detected by cDNA microarray technique. According to the hybridization results from oligonucleotide DNA microarray, gene expression patterns and functions were analyzed. Adult group compared to children's, there were differentially expressed genes in 1805, which mainly associated with protein translation, energy synthesis and DNA replication, and closely related to the development process of human epidermal stem cells. Downregulated genes had 716, included GTP binding, sequencespecific DNA binding, MAP kinase phosphatase activity, they related to proliferation and differentiation of epidermal stem cell. Up-regulated genes had 1089, which mainly included cytoskeletal structural protein genes and associated with cell maturation. These data suggest that the gene expression is obviously different between children and adult epidermal stem cell in vitro. This may be closely related to different abilities of proliferation and differentiation of human epidermal stem cell and wound healing ability of skin with different developmental stages. It can provide clues to further search for new markers and the development of regulatory genes, and lay the foundation for further applications.
机译:表皮干细胞在形态学上具有未分化细胞的特征,并且是皮肤及其在发育,修复和重建中的辅助生物来源。表皮干细胞的增殖和分化受多种因素影响,例如整联蛋白,信号转导途径和细胞因子。当前的研究尚未能够找到绝对公认的表皮干细胞标记。并就单一基因表达的某些特征及其影响研究取得了一些进展,但总体特征和基因表达的变化规律在法律上尚不清楚。这项研究在培养的儿童和成人皮肤的表皮干细胞中检测到差异表达的基因。样本来自4-12岁儿童和35-55岁成人皮肤。通过胰蛋白酶消化法分离人表皮干细胞,并通过胶原粘附法纯化。从两个样品的表皮干细胞中提取的总RNA。通过cDNA芯片技术检测到的差异表达基因。根据寡核苷酸DNA芯片的杂交结果,分析了基因表达模式和功能。与儿童相比,成人组在1805年存在差异表达的基因,其主要与蛋白质翻译,能量合成和DNA复制有关,并且与人表皮干细胞的发育过程密切相关。下调的基因有716个,包括GTP结合,序列特异性DNA结合,MAP激酶磷酸酶活性,它们与表皮干细胞的增殖和分化有关。上调的基因有1089,主要包括细胞骨架结构蛋白基因,并与细胞成熟有关。这些数据表明,该基因表达在儿童和成人表皮干细胞之间明显不同。这可能与人表皮干细胞的增殖和分化能力的不同以及皮肤在不同发育阶段的伤口愈合能力密切相关。它可以为进一步寻找新标记和调节基因的发展提供线索,并为进一步的应用奠定基础。

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