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apparatus for expanding bio pathway and method for expanding bio pathway

机译:用于扩展生物路径的设备和用于扩展生物路径的方法

摘要

Since bio-pathways are individually and independently constructed using various bio-pathway description languages (KGML, SBML, BIOPAX, etc.) in various bio-pathway related organizations, the present invention effectively integrates and expands bio-pathways expressed in heterogeneous languages . To this end, the present invention comprises a first input module for receiving at least one bio-pathway; A language unification module for converting the at least one biopathway into a first language; A separation module for separating at least one or more biopathways converted into the first language into nodes or relationships; A standardization module for standardizing the node or relationship in standard terms and extracting attribute information related to the node or relationship from at least one or more biopathways separated in the form of the node or relationship; An integration module for integrating at least one or more biopathways separated by the node or relationship; A document knowledge module for generating extension information for expanding the integrated bio-pathway; And an extension module for expanding the integrated bio-pathway using the generated extension information.
机译:由于在各种生物途径相关组织中使用各种生物途径描述语言(KGML,SBML,BIOPAX等)分别和独立地构建了生物途径,所以本发明有效地整合和扩展了以异质语言表达的生物途径。为此,本发明包括用于接收至少一个生物途径的第一输入模块。一种语言统一模块,用于将至少一个生物途径转换为第一语言;分离模块,用于将至少一种或多种转化为第一语言的生物途径分离为节点或关系;一种标准化模块,用于以标准术语标准化所述节点或关系,并从以所述节点或关系的形式分离的至少一个或多个生物途径中提取与所述节点或关系有关的属性信息;一种整合模块,用于整合至少一个或多个由节点或关系分隔的生物通路;一个文档知识模块,用于生成扩展信息以扩展集成的生物途径;以及扩展模块,用于使用所生成的扩展信息来扩展集成的生物途径。

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