Biological analysis systems and methods for operating the devices of the systems are provided. The library preparation device of the biological analysis system can perform a library preparation protocol on the biological sample. Here, the library preparation protocol is determined based on information from the biological sample and encoded identifiers associated with resources used by the library preparation device. A sequencing device can perform a sequencing process on a library prepared by the library preparation device. The configuration of the sequencing device to perform the process includes receiving sample information generated by the library preparation device and processing the sample information to generate configuration information about the sequencing device. obtain.
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