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Observations on the strength of hydrogen bonding

机译:氢键强度的观察

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Both proton transfer and hydrogen bonding play important roles in biological systems. In order to measure hydrogen bond basicity, we are building a new scale that differs significantly from the pK_a scale of proton transfer basicity. The strength of hydrogen bond acceptors (HBAs) is measured from the Gibbs energy change △G_(HB) for the formation of 1:1 hydrogen bonding complexes between hydrogen bond acceptors (bases) and a reference hydrogen bond donor (4-fluorophenol) in tetrachloromethane at 298 K. The pK_(HB) database (1.364 pK_(HB) = -△G_(HB) (kcal mol~(-1)) comprises ca. 1000 hydrogen bond acceptors. The HBA strength depends on (i) the position of the acceptor atom in the periodic table, (ii) polarizability, field/inductive and resonance effects of substituents around the acceptor atom, and (iii) proximity effects including steric hindrance of the acceptor site, intramolecular hydrogen bonding and lone-pair-lone-pair repulsions. The ranking of oxygen and sp nitrogen bases does not depend very much on the solvent and the reference hydrogen bond donor, but sp~2 and sp~3 nitrogen bases gain strength in solvents of higher reaction field than CCl_4 and lose strength toward CH and weak NH donors. The complete scatter pattern exhibited by the pK_a versus pK_(HB) plot demonstrates the non-equivalence of the two scales. The HBA strength scale is applied to the prediction of the hydrogen bonding site in polybasic drugs (e.g strychnine and carbimazole), and to the calculation of octanol-water partition coefficients. A possible relationship between HBA strength and antihistaminic activity is studied for the 'push-pull' drugs cimetidine, ranitidine and famotidine.
机译:质子转移和氢键均在生物系统中起重要作用。为了测量氢键的碱度,我们正在建立一个新的标度,该标度与质子传递碱度的pK_a标度有显着差异。氢键受体(HBAs)的强度由吉布斯能量变化△G_(HB)测得,用于在氢键受体(碱)和参考氢键供体(4-氟苯酚)之间形成1:1的氢键配合物。 pK_(HB)数据库(1.364 pK_(HB)=-△G_(HB)(kcal mol〜(-1)))包含约1000个氢键受体.HBA强度取决于(i)受体原子在元素周期表中的位置,(ii)受体原子周围的取代基的极化率,场/感应和共振效应,以及(iii)邻近效应,包括受体位点的空间位阻,分子内氢键和孤对氧和sp氮碱基的排名与溶剂和参比氢键供体的关系不大,但是sp〜2和sp〜3氮碱基在比CCl_4高的反应场中获得强度而失去CH和弱NH供体的强度。 pK_a对pK_(HB)图所显示的er模式表明了两个量表的不等价性。 HBA强度标度用于预测多元药物(例如,士的宁和咔咪唑)中的氢键结合位点,并用于辛醇-水分配系数的计算。对于“推挽”药物西咪替丁,雷尼替丁和法莫替丁,研究了HBA强度与抗组胺活性之间的可能关系。

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