首页> 外文期刊>Nature protocols erecipes for researchers >Tracking the sources of blood meals of parasitic arthropods using shotgun proteomics and unidentified tandem mass spectral libraries
【24h】

Tracking the sources of blood meals of parasitic arthropods using shotgun proteomics and unidentified tandem mass spectral libraries

机译:使用shot弹枪蛋白质组学和未识别的串联质谱库跟踪寄生节肢动物的血粉来源

获取原文
获取原文并翻译 | 示例
获取外文期刊封面目录资料

摘要

Identifying the species on which hematophagous arthropods feed is crucial for studying the factors that affect pathogen distributions and that can aid public health. Here we describe a protocol to identify the species a parasitic arthropod has previously fed upon by identifying the source of the remnants of a previous blood meal via shotgun proteomics and spectral matching. The protocol is a nontargeted approach that uses the entire detected blood proteome for source identification; it does not require a priori knowledge of genome or protein sequences. Instead, reference spectral libraries are compiled from the blood of multiple host species by using SpectraSTST, which takes ~4 d; the identification of the species from which a previous blood meal of a hematophagous arthropod was taken is achieved with spectral matching against the reference spectral libraries, which takes approximately another 4 d. This method is robust against random degradation of the blood meal and can identify unknown blood remnants months after the feeding event.
机译:识别食血节肢动物的饲料种类对于研究影响病原体分布并有助于公共卫生的因素至关重要。在这里,我们描述了一种协议,通过shot弹枪蛋白质组学和光谱匹配来确定先前血粉残留物的来源,从而确定寄生节肢动物先前已觅食的物种。该协议是一种非针对性的方法,它使用检测到的整个血液蛋白质组进行来源识别。它不需要先验知识的基因组或蛋白质序列。取而代之的是,使用SpectraSTST从多个宿主物种的血液中编译参考光谱库,该过程耗时约4 d。通过与参考光谱库进行光谱匹配,大约需要另外4 d的光谱匹配,可以实现对以前采食了食血节肢动物血粉的物种的鉴定。该方法对血粉的随机降解具有鲁棒性,并且可以在进食事件后数月内识别出未知的血液残留物。

著录项

相似文献

  • 外文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号