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Genetic variability and molecular phylogeny of Pleurotus eryngii species-complex isolates from Iran, and notes on the systematics of Asiatic populations

机译:伊朗杏鲍菇菌种复杂分离株的遗传变异和分子系统发育,以及关于亚洲种群系统学的注释

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The Pleurotus eryngii species-complex includes taxa of the northern hemisphere growing in association with plants of the family Apiaceae (umbellifers). In this study, 45 Pleurotus strains were isolated from five different host-plants: Ferula ovina, F. assa-foetida, Smyrniopsis aucheri, Kellusia odoratissima, and Cachrys ferulacea; all plant species, with the exception of C. ferulacea, are reported for the first time as hosts for this fungal group. Random amplified polymorphic DNA-PCR (RAPD) analysis and nucleotide sequence data from the internal transcribed spacer of the nuclear rRNA genes (ITS1, 5.8S and ITS2) were used for assessing genetic diversity and for determining phylogenetic relationships among the populations studied. Results permitted the grouping of the strains studied into three major clusters corresponding mainly to the nature of the host-plant: the first included isolates collected from Ferula spp. only, the second included isolates originating from C. ferulacea only but from various sampling locations, and the third included all K. odoratissima and S. aucheri associated strains plus a few isolates collected from F. ovina and C. ferulacea. The grouping of the Iranian material, in conjunction with the position in the resulting phylograms of other previously obtained P. eryngii complex sequences, revealed that the first cluster is related to the asiatic 'P. nebrodensis' (or to the asiatic Ferula spp. associated Pleuroti), the second forms a rather distinct lineage which is linked with reference strains originally classified as P. fossulatus, whereas the third cluster falls within the main part (or the "core") of this complex, i.e., P. eryngii. Pleurotus populations growing on umbellifers in Iran seem either to have recently diverged through a sympatric speciation process based mainly on ecological factors (e.g., P. fossulatus), or they form part of a rather wide agglomerate associated with various host-plants where exchange of genetic material is still in progress (i.e., P. eryngii).
机译:杏鲍菇菌种复杂,包括北半球的分类群,与伞形科(伞形科)的植物一起生长。在这项研究中,从五个不同的寄主植物中分离了45种杏鲍菇菌株:卵形阿魏拉,F。assa-foetida,Smyrniopsis aucheri,Kellusia odoratissima和Cachrys ferulacea。首次报道了所有植物物种,除了阿魏杆菌(C. ferulacea),都是该真菌群的寄主。来自核rRNA基因(ITS1、5.8S和ITS2)内部转录间隔区的随机扩增多态DNA-PCR(RAPD)分析和核苷酸序列数据用于评估遗传多样性和确定所研究种群之间的系统发育关系。结果允许将所研究的菌株分组为三个主要群,主要对应于宿主植物的性质:第一个群包括从Ferula spp收集的分离株。仅第二个包括仅来自阿魏假单胞菌但来自不同采样地点的分离株,第三个包括所有与香气假单胞菌和奥氏假单胞菌相关的菌株,以及从卵形假单胞菌和阿魏假单胞菌收集的一些分离株。伊朗物质的分组,再加上其他先前获得的P. eryngii复杂序列在最终系统书中的位置,揭示了第一个簇与亚洲人的P有关。 nebrodensis(或与亚洲Ferula spp。有关的Pleuroti),第二种形成了相当不同的谱系,与最初归类为P. fossulatus的参考菌株相关,而第三种则落在主要部分(或“核心”)内这种复合物,即P. eryngii。伊朗以伞形虫为生的杏鲍菇种群最近似乎要么通过主要基于生态因素(例如,P。fossulatus)的同养物种形成过程而分化,要么就形成了与各种寄主植物相关联的相当广泛的聚集体的一部分,在这些聚集体中,基因交换资料仍在进行中(即杏鲍菇)。

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