Structure of an E3:E2～Ub Complex Reveals an Allosteric Mechanism Shared among RING/U-box Ligases

摘要

Despite the widespread importance of RING/U-box E3 ubiquitin ligases in ubiquitin (Ub) signaling, the mechanism by which this class of enzymes facilitates Ub transfer remains enigmatic. Here, we present a structural model for a RING/U-box E3:E2～Ub complex poised for Ub transfer. The model and additional analyses reveal that E3 binding biases dynamic E2～Ub ensembles toward closed conformations with enhanced reactivity for substrate lysines. We identify a key hydrogen bond between a highly conserved E3 side chain and an E2 backbone carbonyl, observed in all structures of active RING/U-Box E3/E2 pairs, as the linchpin for allosteric activation of E2～Ub. The conformational biasing mechanism is generalizable across diverse E2s and RING/U-box E3s, but is not shared by HECT-type E3s. The results provide a structural model for a RING/U-box E3:E2～Ub ligase complex and identify the long sought-after source of allostery for RING/U-Box activation of E2～Ub conjugates.