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Phylogeography of an Atlantic forest passerine reveals demographic stability through the last glacial maximum

机译:大西洋森林雀形目的系统记录揭示了直到最后一次冰川最大值时的人口稳定性

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摘要

In this study we analyzed the phylogeographic pattern and historical demography of an endemic Atlantic forest (AF) bird, Basileuterus leucoblepharus, and test the influence of the last glacial maximum (LGM) on its population effective size using coalescent simulations. We address two main questions: (i) Does B. leucoblepharus present population genetic structure congruent with the patterns observed for other AF organisms? (ii) How did the LGM affect the effective population size of B. leucoblepharus? We sequenced 914. bp of the mitochondrial gene cytochrome b and 512. bp of the nuclear intron 5 of beta-fibrinogen of 62 individuals from 15 localities along the AF. Both molecular markers revealed no genetic structure in B. leucoblepharus. Neutrality tests based on both loci showed significant demographic expansion. The extended Bayesian skyline plot showed that the species seems to have experienced demographic expansion starting around 300,000. years ago, during the late Pleistocene. This date does not coincide with the LGM and the dynamics of population size showed stability during the LGM. To further test the effect of the LGM on this species, we simulated seven demographic scenarios to explore whether populations suffered specific bottlenecks. The scenarios most congruent with our data were population stability during the LGM with bottlenecks older than this period. This is the first example of an AF organism that does not show phylogeographic breaks caused by vicariant events associated to climate change and geotectonic activities in the Quaternary. Differential ecological, environmental tolerances and habitat requirements are possibly influencing the different evolutionary histories of these organisms. Our results show that the history of organism diversification in this megadiverse Neotropical forest is complex.
机译:在这项研究中,我们分析了特有的大西洋森林(AF)鸟巴西白带(Basileuterus leucoblepharus)的地理图案和历史人口统计学,并使用聚结模拟测试了最后一个冰期最大值(LGM)对其种群有效大小的影响。我们要解决两个主要问题:(i)白带芽孢杆菌目前的种群遗传结构是否与其他房颤生物观察到的模式一致? (ii)LGM如何影响白卵双歧杆菌的有效种群规模?我们对沿着AF的15个地区的62个人的线粒体基因细胞色素b的914. bp和β-纤维蛋白原的512 bp的内含子进行了测序。两种分子标记均未显示白隐双歧杆菌的遗传结构。基于两个基因座的中立性测试均显示人口统计学显着扩展。扩展的贝叶斯天际线图表明,该物种似乎经历了人口增长,大约从30万开始。多年前,在更新世晚期。该日期与LGM不一致,并且LGM期间种群规模的动态显示稳定。为了进一步测试LGM对这个物种的影响,我们模拟了七个人口统计学场景,以探索种群是否遭受特定的瓶颈。与我们的数据最一致的场景是在LGM期间人口稳定,且瓶颈时期早于此时期。这是AF生物体的第一个例子,它没有显示由于与第四纪气候变化和大地构造活动有关的残暴事件而引起的地理断裂。不同的生态,环境容忍度和栖息地要求可能会影响这些生物的不同进化史。我们的结果表明,在这个巨大的新热带森林中,生物多样性的历史非常复杂。

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