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Evolutionary processes driving spatial patterns of intraspecific genetic diversity in river ecosystems

机译:进化过程驱动河流生态系统种内遗传多样性的空间格局

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摘要

Describing, understanding and predicting the spatial distribution of genetic diversity is a central issue in biological sciences. In river landscapes, it is generally predicted that neutral genetic diversity should increase downstream, but there have been few attempts to test and validate this assumption across taxonomic groups. Moreover, it is still unclear what are the evolutionary processes that may generate this apparent spatial pattern of diversity. Here, we quantitatively synthesized published results from diverse taxa living in river ecosystems, and we performed a meta-analysis to show that a downstream increase in intraspecific genetic diversity (DIGD) actually constitutes a general spatial pattern of biodiversity that is repeatable across taxa. We further demonstrated that DIGD was stronger for strictly waterborne dispersing than for overland dispersing species. However, for a restricted data set focusing on fishes, there was no evidence that DIGD was related to particular species traits. We then searched for general processes underlying DIGD by simulating genetic data in dendritic-like river systems. Simulations revealed that the three processes we considered (downstream-biased dispersal, increase in habitat availability downstream and upstream-directed colonization) might generate DIGD. Using random forest models, we identified from simulations a set of highly informative summary statistics allowing discriminating among the processes causing DIGD. Finally, combining these discriminant statistics and approximate Bayesian computations on a set of twelve empirical case studies, we hypothesized that DIGD were most likely due to the interaction of two of these three processes and that contrary to expectation, they were not solely caused by downstream-biased dispersal.
机译:描述,理解和预测遗传多样性的空间分布是生物科学中的中心问题。在河流景观中,一般预计中性遗传多样性应在下游增加,但是很少有尝试在分类学组中测试和验证这一假设。此外,尚不清楚哪些进化过程可能产生这种明显的多样性空间格局。在这里,我们定量合成了生活在河流生态系统中的各种分类单元的已发表结果,并且我们进行了荟萃分析,以显示种内遗传多样性(DIGD)的下游增加实际上构成了整个分类单元可重复的生物多样性的总体空间格局。我们进一步证明,对于严格的水分散体,DIGD比陆上分散体更强。但是,对于以鱼类为中心的有限数据集,没有证据表明DIGD与特定物种的性状有关。然后,我们通过模拟树突状河流系统中的遗传数据来搜索DIGD的一般过程。模拟显示,我们考虑的三个过程(下游偏向的扩散,下游生境可用性的增加和上游定殖的定居)可能会产生DIGD。使用随机森林模型,我们从模拟中识别出一组高度有用的摘要统计信息,从而可以区分导致DIGD的过程。最后,将这些判别统计量和近似贝叶斯计算结合在一起,进行了一组十二个经验案例研究,我们假设DIGD最有可能是由于这三个过程中的两个相互作用,并且与预期相反,它们并非仅由下游引起。偏向分散。

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