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Evolution and Function of the Globin Intergenic Regulatory Regions of the Antarctic Dragonfishes (Notothenioidei: Bathydraconidae)

机译:南极龙鱼球蛋白基因间调控区域的进化和功能(Notothenioidei:Bathydraconidae)

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As the Southern Ocean cooled to -1.8 degrees C over the past 40 My, the teleostean clade Notothenioidei diversified and, under reduced selection pressure for an oxygen-transporting apparatus, became less reliant on hemoglobin and red blood cells. At the extreme of this trend, the crown group of Antarctic icefishes (Channichthyidae) lost both components of oxygen transport. Under the decreased selection scenario, we hypothesized that the Antarctic dragonfishes (Bathydraconidae, the red-blooded sister clade to the icefishes) evolved lower blood hemoglobin concentrations because their globin gene complexes (alpha- and beta-globin gene pairs linked by a regulatory intergene) transcribe globin mRNAs less effectively than those of basal notothenioids (e.g., the Nototheniidae [notothens]). To test our hypothesis, we 1) sequenced the alpha/beta-intergenes of the adult globin complexes of three notothen and eight dragonfish species and 2) measured globin transcript levels in representative species from each group. The typical nototheniid intergene was similar to 3-4 kb in length. The bathydraconid intergenes resolved into three subclasses (long [3.8 kb], intermediate [3.0 kb], and short [1.5-2.3 kb]) that corresponded to the three subclades proposed for the taxon. Although they varied in length due to indels, the three notothen and eight dragonfish intergenes contained a conserved similar to 90-nt element that we have previously shown to be required for globin gene transcription. Using the quantitative polymerase chain reaction, we found that globin mRNA levels in red cells from one notothen species and from one species of each dragonfish subclade were equivalent statistically. Thus, our results indicate that the bathydraconids have evolved adult globin loci whose regulatory intergenes tend to be shorter than those of the more basal nototheniids yet are equivalent in transcriptional efficacy. Their low blood hemoglobin concentrations are most likely due to reduction in hematocrit.
机译:在过去的40 My里,随着南大洋冷却至-1.8摄氏度,硬骨鱼进化枝Notothenioidei变得多样化,并且在氧气输送设备的选择压力降低的情况下,对血红蛋白和红细胞的依赖性降低。在这种趋势的极端情况下,南极冰鱼(Ch科)的冠群失去了氧气传输的两个组成部分。在选择减少的情况下,我们假设南极龙鱼(Bathydraconidae,红鱼姊妹进化枝对冰鱼)进化出较低的血液血红蛋白浓度,因为它们的球蛋白基因复合体(由调节性互基因连接的α-和β-球蛋白基因对)转录珠蛋白mRNA的效率不如基底类异戊二烯类(例如,Nototheniidae [notothens])。为了检验我们的假设,我们1)对3个Notothen和8个Dragonfish物种的成年球蛋白复合体的α/β-互基因进行了测序,以及2)在每组代表性物种中测量了globin转录水平。典型的异戊二烯中间基因的长度类似于3-4 kb。拟水单胞菌属的基因间基因分为三个亚类(长[3.8 kb],中间[3.0 kb]和短[1.5-2.3 kb]),分别对应于分类单元的三个亚群。尽管它们因插入缺失而长度有所变化,但三个诺滕氏和八个龙鱼间基因包含一个保守的类似于90 nt的元件,我们之前已经证明球蛋白基因的转录是必需的。使用定量聚合酶链反应,我们发现来自一种notothent物种和来自每个龙鱼子代的一种物种的红细胞中球蛋白mRNA水平在统计学上是相等的。因此,我们的结果表明,水藻类生物体已进化成年的球蛋白基因座,其调节基因间的基因倾向于比那些较基础的拟南芥的短,但在转录效力上却是相同的。他们的低血红蛋白浓度很可能是由于血细胞比容降低所致。

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