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首页> 外文期刊>Marine Biodiversity >Analysis of the genetic variability of Artemia franciscana Kellogg, 1906 from the Great Salt Lake (USA) based on mtDNA sequences, ISSR genomic fingerprinting and biometry
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Analysis of the genetic variability of Artemia franciscana Kellogg, 1906 from the Great Salt Lake (USA) based on mtDNA sequences, ISSR genomic fingerprinting and biometry

机译:基于线粒体DNA序列,ISSR基因组指纹图谱和生物测定法分析大盐湖(美国)的大叶蒿(Artemia franciscana Kellogg,1906年)的遗传变异性

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摘要

The genetic structure of the brine shrimp Artemia franciscana, an extremophile halophilic microcrustacean, from the Great Salt Lake (USA), was investigated by analysis of nucleotide sequences of the mitochondrial cytochrome c oxidase subunit I (COI), genomic fingerprinting by ISSR-PCR (inter-simple sequence repeats polymerase chain reaction) and biometry. Samples from six different geographical localities of Great Salt Lake revealed ten distinct haplotypes with a mean high level of haplotype diversity (HD = 0.6). Phylogenetic and genetic fingerprinting analyses supported the null hypothesis, that the brine shrimps of this lake form a panmictic gene pool with a low level of genetic differentiation index (F (ST) = 0.05) and a high rate of gene flow (Nm = 2.8) between geographical areas. Moreover, morphological parameters revealed no population structure among all examined populations. Neutrality tests and mismatch distribution revealed that A. franciscana has undergone a recent population expansion. In spite of hypersaline conditions in the Northern (Gunnison Bay) regions of the Great Salt Lake, the genetic population structures of different areas of the lake are not linked to ecological or limnological conditions. Therefore, A. franciscana from the Great Salt Lake should be considered as a single management unit for conservation.
机译:通过分析线粒体细胞色素c氧化酶亚基I(COI)的核苷酸序列,通过ISSR-PCR进行基因组指纹分析,研究了来自大盐湖(美国)的一种极端虾嗜盐微甲壳动物卤虾虾(Artemia franciscana)的遗传结构。简单序列间重复聚合酶链反应)和生物测定。来自大盐湖六个不同地理位置的样本显示十个不同的单倍型,平均单倍型平均水平较高(HD = 0.6)。系统发育和遗传指纹分析支持零假设,即该湖的盐水虾形成了一个具有较低遗传分化指数(F(ST)= 0.05)和高基因流率(Nm = 2.8)的全景基因库。地理区域之间。此外,形态学参数显示在所有检查的种群中没有种群结构。中性测试和不匹配分布表明,A。franciscana最近经历了种群扩展。尽管大盐湖的北部(甘尼森湾)地区盐度高,但该湖不同地区的遗传种群结构与生态或气候条件无关。因此,来自大盐湖的方济会应该被视为一个单一的保护管理单位。

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