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A method for measuring the comparability of different sampling methodsused in biological surveys: implications for data integration andsynthesis

机译:一种用于生物调查的不同采样方法的可比性度量方法:对数据集成和综合的启示

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摘要

Numerous methods have been developed to sample the biota occurring in different ecosystems. However, the comparability of data derived from different sampling methods is generally unknown and is a major concern when integrating data from different studies. Examination of assemblage-level attributes such as taxa richness and biotic index scores is generally inappropriate for evaluating the degree to which different sampling methods produce comparable descriptions of entire assemblages, because these measures provide no information regarding taxonomic composition. Multivariate methods are generally more appropriate for this purpose, but some of the methods previously used are not satisfactory and others have not been tested. A useful measure of sampling-method comparability (SMC) should be independent of sampling effort, independent of the sites sampled and have an explicit biological interpretation. Simulated data were used to compare two potential methods of assessing SMC, the R-value produced by ANOSIM and a modified version of classification strength (CS-SMC) derived from Van Sickle's Mean Similarity Analysis. Analyses were based on similarities between the assemblages captured by two different sampling methods (electrofishing and seining) employed at the same sites. Similarities were calculated two different ways: the Bray-Curtis index and the Jaccard coefficient. Based on simulated data, ANOSIM R-values were strongly affected by sampling effort, highly variable across sites and difficult to interpret biologically. In contrast, CS-SMC values were highly stable over a range of sampling effort, across sites and easy to interpret biologically. Application of CS-SMC to field data showed that seining and electrofishing produced highly comparable samples of fish in small streams: 97% comparable on average for species lists and 94% comparable for relative abundances. Kicknet and Surber samples of benthic invertebrates were also comparable after being standardised to a fixed count, but to a lesser extent than fish samples: 77% comparable on average for the taxa lists and 93% comparable for relative abundances. CS-SMC should be of general use when integrating and synthesising assemblage data from a variety of assemblages.
机译:已经开发出许多方法来采样在不同生态系统中出现的生物群。但是,从不同采样方法获得的数据的可比性通常是未知的,并且在整合来自不同研究的数据时是主要关注的问题。通常,对于分类级别属性(例如,分类单元丰富度和生物指数评分)的检查不适合评估不同采样方法对整个组合产生可比较描述的程度,因为这些措施无法提供有关分类组成的信息。多变量方法通常更适合于此目的,但是先前使用的某些方法并不令人满意,而其他方法尚未经过测试。采样方法可比性(SMC)的有用度量应独立于采样工作,独立于所采样的位置并且具有明确的生物学解释。模拟数据用于比较评估SMC的两种潜在方法,即ANOSIM产生的R值和从Van Sickle的均值相似性分析得出的分类强度的改进版本(CS-SMC)。分析是基于在相同地点采用的两种不同采样方法(电钓鱼和围网)捕获的组合之间的相似性。计算相似度的方法有两种:Bray-Curtis指数和Jaccard系数。根据模拟数据,ANOSIM R值会受到采样工作的强烈影响,各个站点之间的差异很大,并且难以从生物学上进行解释。相反,CS-SMC值在整个站点范围内的一系列采样工作中高度稳定,并且易于生物学解释。 CS-SMC在现场数据中的应用表明,围网捕捞和电鱼捕捞可在小溪流中产生高度可比的鱼类样品:物种清单平均可比97%,相对丰度可比94%。底栖无脊椎动物的Kicknet和Surber样本在标准化为固定数量之后也具有可比性,但程度不及鱼类样本:分类群平均可比77%,相对丰度可比93%。在集成和综合来自各种组合的组合数据时,CS-SMC应该普遍使用。

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