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Membrane curvature and surface area per lipid affect the conformation and oligomeric state of HIV-1 fusion peptide: A combined FTIR and MD simulation study

机译:膜曲率和每个脂质的表面积影响HIV-1融合肽的构象和寡聚状态:FTIR和MD组合模拟研究

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摘要

Fourier-transformed infrared spectroscopy (FTIR) and molecular dynamics (MD) simulation results are presented to support our hypothesis that the conformation and the oligomeric state of the HIV-1 gp41 fusion domain or fusion peptide (gp41-FP) are determined by the membrane surface area per lipid (APL), which is affected by the membrane curvature. FTIR of the gp41-FP in the Aerosol-OT (AOT) reversed micellar system showed that as APL decreases from similar to 50 to 35 angstrom(2) by varying the AOT/water ratio, the FP changes from the monomeric alpha-helical to the oligomeric p-sheet structure. MD simulations in POPE lipid bilayer systems showed that as the APL decreases by applying a negative surface tension, helical monomers start to unfold into turn-like structures. Furthermore, an increase in the applied lateral pressure during nonequilibrium MD simulations favored the formation of beta-sheet structure. These results provide better insight into the relationship between the structures of the gp41-FP and the membrane, which is essential in understanding the membrane fusion process. The implication of the results of this work on what is the fusogenic structure of the HIV-1 FP is discussed. (c) 2007 Elsevier B.V. All rights reserved.
机译:提出了傅里叶变换红外光谱(FTIR)和分子动力学(MD)模拟结果,以支持我们的假设:HIV-1 gp41融合域或融合肽(gp41-FP)的构象和寡聚状态由膜决定每个脂质的表面积(APL),受膜曲率的影响。气溶胶-OT(AOT)逆胶束系统中gp41-FP的FTIR显示,通过改变AOT /水比,APL从相似的50埃降低到35埃(2),FP从单体α-螺旋变为低聚p-片状结构。在POPE脂质双层系统中的MD模拟表明,当通过施加负表面张力而使APL降低时,螺旋状单体开始展开为匝状结构。此外,在非平衡MD模拟过程中施加的侧向压力增加有利于β-折叠结构的形成。这些结果提供了对gp41-FP的结构与膜之间关系的更好的了解,这对于理解膜融合过程至关重要。讨论了这项工作的结果对HIV-1 FP的融合结构的意义。 (c)2007 Elsevier B.V.保留所有权利。

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