首页> 外文期刊>Analytical and bioanalytical chemistry >Discrimination between genetically identical peony roots from different regions of origin based on 1H-nuclear magnetic resonance spectroscopy-based metabolomics: Determination of the geographical origins and estimation of the mixing proportions of blended samples
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Discrimination between genetically identical peony roots from different regions of origin based on 1H-nuclear magnetic resonance spectroscopy-based metabolomics: Determination of the geographical origins and estimation of the mixing proportions of blended samples

机译:基于1H核磁共振波谱的代谢组学对不同产地的遗传相同牡丹根进行区分:地理起源的确定和混合样品的混合比例的估计

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Sixty peony root training samples of the same age were collected from various regions in Korea and China, and their genetic diversity was investigated for 23 chloroplast intergenic space regions. All samples were genetically indistinguishable, indicating that the DNA-based techniques employed were not appropriate for determining the samples' regions of origin. In contrast, ~1H-nuclear magnetic resonance (~1H-NMR) spectroscopy-based metabolomics coupled with multivariate statistical analysis revealed a clear difference between the metabolic profiles of the Korean and Chinese samples. Orthogonal projections on the latent structure-discrimination analysis allowed the identification of potential metabolite markers, including γ-aminobutyric acid, arginine, alanine, paeoniflorin, and albiflorin, that could be useful for classifying the samples' regions of origin. The validity of the discrimination model was tested using the response permutation test and blind prediction test for internal and external validations, respectively. Metabolomic data of 21 blended samples consisting of Korean and Chinese samples mixed at various proportions were also acquired by ~1H-NMR analysis. After data preprocessing which was designed to eliminate uncontrolled deviations in the spectral data between the testing and training sets, a new statistical procedure for estimating the mixing proportions of blended samples was established using the constrained least squares method for the first time. The predictive procedure exhibited relatively good predictability (adjusted R ~2 = 0.7669), and thus has the potential to be used in the quality control of peony root by providing correct indications for a sample's geographical origins. [Figure not available: see fulltext.]
机译:从韩国和中国的不同地区收集了60个相同年龄的牡丹根训练样品,并研究了23个叶绿体基因间空间区域的遗传多样性。所有样品在遗传上均无法区分,表明所采用的基于DNA的技术不适用于确定样品的来源区域。相反,基于〜1H核磁共振(〜1H-NMR)光谱的代谢组学与多变量统计分析相结合,揭示了韩国和中国样品代谢谱之间的明显差异。潜在结构识别分析上的正交投影可以识别潜在的代谢物标记物,包括γ-氨基丁酸,精氨酸,丙氨酸,flor药苷和白花素,可用于对样品的起源区域进行分类。分别使用响应置换测试和盲预测测试对内部和外部验证来测试判别模型的有效性。还通过〜1H-NMR分析获得了由韩国和中国样品以不同比例混合而成的21种共混样品的代谢组学数据。经过旨在消除测试和训练集之间光谱数据不受控制的偏差的数据预处理之后,首次使用约束最小二乘法建立了一种新的统计程序,用于估计混合样品的混合比例。该预测程序显示出相对较好的可预测性(调整后的R〜2 = 0.7669),因此有可能通过为样品的地理起源提供正确的指示来用于牡丹根的质量控制。 [图不可用:请参见全文。]

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