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Inducible promoters and functional genomic approaches for the genetic engineering of filamentous fungi

机译:丝状真菌基因工程的诱导型启动子和功能基因组方法

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摘要

In industry, filamentous fungi have a prominent position as producers of economically relevant primary or secondary metabolites. Particularly, the advent of genetic engineering of filamentous fungi has led to a growing number of molecular tools to adopt filamentous fungi for biotechnical applications. Here, we summarize recent developments in fungal biology, where fungal host systems were genetically manipulated for optimal industrial applications. Firstly, available inducible promoter systems depending on carbon sources are mentioned together with various adaptations of the Tet-Off and Tet-On systems for use in different industrial fungal host systems. Subsequently, we summarize representative examples, where diverse expression systems were used for the production of heterologous products, including proteins from mammalian systems. In addition, the progressing usage of genomics and functional genomics data for strain improvement strategies are addressed, for the identification of biosynthesis genes and their related metabolic pathways. Functional genomic data are further used to decipher genomic differences between wild-type and high-production strains, in order to optimize endogenous metabolic pathways that lead to the synthesis of pharmaceutically relevant end products. Lastly, we discuss how molecular data sets can be used to modify products for optimized applications.
机译:在工业中,丝状真菌作为经济相关的原发性或次生代谢物的生产者具有突出地位。特别是,丝状真菌基因工程的出现导致了越来越多的分子工具,用于采用生物技术应用的丝状真菌。在这里,我们总结了真菌生物学的最新发展,其中真菌宿主系统被遗传地操纵以获得最佳的工业应用。首先,根据碳源的可用诱导型启动子体系与用于不同工业真菌宿主系统的各种改进和TET的系统一起提及。随后,我们总结了代表性实例,其中各种表达系统用于生产异源产品,包括来自哺乳动物系统的蛋白质。此外,针对生物合成基因及其相关代谢途径进行了解决基因组学和功能基因组学数据的进展和功能基因组学数据。功能基因组数据还用于破解野生型和高产量菌株之间的基因组差异,以优化导致药学相关最终产品的合成的内源性代谢途径。最后,我们讨论了如何使用分子数据集来修改优化应用的产品。

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