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Factors affecting genetic correlation estimates from dairy sires' genetic evaluations to assess genotype-environment interaction.

机译:影响奶牛遗传评估基因型与环境相互作用的遗传相关性估计的因素。

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摘要

Effects of trait heritability (0.05 or 0.25), effective daughters number (30 to 500), sires number (10 to 500), and sire selection (selecting or not the top 50% sires), were evaluated based upon standard error (SE) and bias of genetic correlations (rG) between countries estimated from Calo's method (rG) using simulated data. Calo's method is based on correlations between sire's predicted transmitting abilities (PTA) in two countries adjusted for reliabilities. Unselected sire's data analysis gave nearly unbiased rG in all cases, but selected sire's data analysis gave underestimates. Bias was from -0.34 to -0.05 for the 0.25 heritability trait (milk yield), and from -0.42 to -0.17 for the 0.05 heritability trait (functional). Underestimation of rG decreased with increased effective number of daughters (PTA's reliability), but was quite insensitive to number of sires. The SE of genetic correlations estimates decreased with increased PTA's reliability and sires number, and was higher for selected sires. Approximately 50 sires with PTA's reliabilities >=0.97 on each country are required to obtain accurate (SE <=0.02) and unbiased (bias <=0.05 ) rG with Calo's method using the best 50% selected sires. Many genetic correlation estimates between countries, already published using the Calo's method, may be underestimates, particularly for low heritability traits, and with low number of effective daughters in the importing country. Therefore, caution is required before interpreting the published rG<1 as evidence for genotype-environment interaction.
机译:根据标准误差(SE)评估性状遗传力(0.05或0.25),有效子代数(30至500),父系数(10至500)和父系选择(选择或不选择前50%的父系)的影响。和Calo方法(r G )使用模拟数据估算的国家之间的遗传相关性(r G )偏差。 Calo的方法基于对两个国家的父亲的预测传播能力(PTA)之间的相关性进行调整后的可靠性。在所有情况下,未选定父亲的数据分析都给出了几乎无偏的r G ,但是未选定父亲的数据分析给出了低估的情况。 0.25遗传性状(产奶量)的偏差为-0.34至-0.05,0.05遗传性状(功能性)的偏差为-0.42至-0.17。 r G 的低估随着子代有效数量的增加而降低(PTA的可靠性),但对父本数量不敏感。遗传相关性的SE估计值随着PTA可靠性和父本数量的增加而降低,而选定父本更高。在每个国家/地区,大约需要50个PTA可靠性> = 0.97的父亲,才能通过Calo方法使用最佳50%选定父亲来获得准确(SE <= 0.02)和无偏(bias <= 0.05)r G 。已经使用Calo方法发表的国家之间的许多遗传相关性估计值可能被低估了,特别是对于遗传力低的特征,以及在进口国中有效女儿数量少的情况。因此,在解释发表的r G <1作为基因型-环境相互作用的证据之前,需要谨慎行事。

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