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首页> 外文期刊>Biochemistry >Cyanolysis and azidolysis of epoxides by haloalcohol dehalogenase: Theoretical study of the reaction mechanism and origins of regioselectivity
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Cyanolysis and azidolysis of epoxides by haloalcohol dehalogenase: Theoretical study of the reaction mechanism and origins of regioselectivity

机译:卤代醇脱卤素酶的氰基溶解和壬氧化物分解:理论研究反应机制及地区渊源的起源

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摘要

Haloalcohol dehalogenase HheC catalyzes the reversible dehalogenation of vicinal haloalcohols to form epoxides and free halides. In addition, HheC is able to catalyze the irreversible and highly regioselective ring-opening of epoxides with nonhalide nucleophiles, such as CN- and N-3(-). For azidolysis of aromatic epoxides, the regioselectivity observed with HheC is opposite to the regioselectivity of the nonenzymatic epoxide-opening. This, together with a relatively broad substrate specificity, makes HheC a promising tool for biocatalytic applications. We have designed large quantum chemical models of the HheC active site and used density functional theory to study the reaction mechanism of the HheC-catalyzed ring-opening of (R)-styrene oxide with the nucleophiles CN- and N3-. Both the cyanolysis and the azidolysis reactions are shown to take place in a single concerted step. The results support the suggested role of the putative Ser132-Tyr145-Arg149 catalytic triad, where Tyr145 acts as a general acid, donating a proton to the substrate, and Arg149 interacts with Tyr145 and facilitates proton abstraction, while Ser132 positions the substrate and reduces the barrier for epoxide opening through interaction with the emerging oxyanion of the substrate. We have also studied the regioselectivity of (R)-styrene oxide opening for both the cyanolysis and the azidolysis reactions. The employed active site model was shown to be able to reproduce the experimentally observed beta-regioselectivity of HheC. In silico mutations of various groups in the HheC active site model were performed to elucidate the important factors governing the regioselectivity.
机译:卤代醇脱卤酶HHEC催化邻卤醇的可逆脱卤,形成环氧化物和游离卤化物。此外,HHEC能够催化具有非卤素亲核试剂的不可逆和高度区域的环氧化物,例如CN-和N-3( - )。对于芳族环氧化物的叠氮化,用HHEC观察的区域选择性与非酶环氧树脂开口的区域选择性相反。这与相对宽的底物特异性一起使HHEC成为生物催化应用的有希望的工具。我们设计了HHEC活性位点的大量子化学模型,并使用密度泛函理论,研究HHEC催化环开环的反应机理与亲核试剂和N3-氧化氢氧化物。逐次逐次齐齐步骤中显示氰基溶解和αzidolysis反应。结果支持推定的Ser132-Tyr145-Arg149催化三合会的建议作用,其中Tyr145用作一般酸,将质子赋给基材,并且arg149与Tyr145相互作用,并促进质子抽象,而Ser132则定位基板并减少环氧化物通过与底物的出现氧基相互作用的环氧化物的屏障。我们还研究了(R) - 氰化物开口的区域选择性,用于氰基溶解和壬二解反应。所用的活性位点模型被证明能够再现实验观察到的HHEC的β-区域选择性。在HHEC活性部位模型中的各种组的硅突变中,进行了阐明了治疗区域选择性的重要因素。

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