首页> 外文期刊>Journal of Computational Chemistry: Organic, Inorganic, Physical, Biological >Blue moon ensemble simulation of aquation free energy profiles applied to mono and bifunctional platinum anticancer drugs
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Blue moon ensemble simulation of aquation free energy profiles applied to mono and bifunctional platinum anticancer drugs

机译:蓝色月亮组合模拟水中的自由能量型材应用于单声道和双官能铂抗癌药物

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摘要

Aquation free energy profiles of neutral cisplatin and cationic monofunctional derivatives, including triaminochloroplatinum(II) and cis-diammine(pyridine)chloroplatinum(II), were computed using state of the art thermodynamic integration, for which temperature and solvent were accounted for explicitly using density functional theory-based canonical molecular dynamics (DFT-MD). For all the systems, the "inverse-hydration" where the metal center acts as an acceptor of hydrogen bond has been observed. This has motivated to consider the inversely bonded solvent molecule in the definition of the reaction coordinate required to initiate the constrained DFT-MD trajectories. We found that there exists little difference in free enthalpies of activation, such that these platinum-based anticancer drugs are likely to behave the same way in aqueous media. Detailed analysis of the microsolvation structure of the square-planar complexes, along with the key steps of the aquation mechanism, is discussed.
机译:使用现有技术的热力学集成的状态计算中性顺铂和阳离子单官能衍生物,包括TriamoCroplopatinum(II)和CIS-氨基(吡啶)氯铂(II)的阳离子单官能衍生物(II)和CIS-氨基胺(II)。用密度明确地占该温度和溶剂基于功能理论的规范分子动力学(DFT-MD)。对于所有系统,已经观察到金属中心作为氢键受体的“反相”。这有动力考虑在引发受约束的DFT-MD轨迹所需的反应坐标的定义中考虑反应粘合的溶剂分子。我们发现,活化的自由焓差异很小,使得这些基于铂的抗癌药物可能在水性介质中表现相同的方式。讨论了方形平面复合物的微透化结构的详细分析,以及水中机制的关键步骤。

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