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首页> 外文期刊>Journal of Computational Chemistry: Organic, Inorganic, Physical, Biological >Efficient computation of free energy surfaces of chemical reactions using ab initio molecular dynamics with hybrid functionals and plane waves
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Efficient computation of free energy surfaces of chemical reactions using ab initio molecular dynamics with hybrid functionals and plane waves

机译:利用AB Initio分子动力学用混合功能和平面波有效地计算化学反应的自由能表面

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摘要

Ab initio molecular dynamics (AIMD) simulations employing density functional theory (DFT) and plane waves are routinely carried out using density functionals at the level of generalized gradient approximation (GGA). AIMD simulations employing hybrid density functionals are of great interest as it offers a more accurate description of structural and dynamic properties than the GGA functionals. However, the computational cost for carrying out calculations using hybrid functionals and plane wave basis set is at least two orders of magnitude higher than that using GGA functionals. Recently, we proposed a strategy that combined the adaptively compressed exchange operator formulation and the multiple time step integration scheme to reduce the computational cost by an order of magnitude [J. Chem. Phys. 151, 151102 (2019)]. In this work, we demonstrate the application of this method to study chemical reactions, in particular, formamide hydrolysis in an alkaline aqueous medium. By actuating our implementation with the well-sliced metadynamics scheme, we can compute the two-dimensional free energy surface of this reaction at the level of hybrid-DFT. This work also investigates the accuracy of the PBE0 (hybrid) and the PBE (GGA) functionals in predicting the free energetics of this chemical reaction.
机译:采用密度泛函理论(DFT)和平面波的AB Initio分子动力学(AIMD)模拟在广义梯度近似水平(GGA)处于使用密度函数进行常规执行。采用混合密度函数的AIMD模拟具有很大的兴趣,因为它提供比GGA功能更准确地描述结构和动态性能。然而,使用混合功能和平面波基的计算成本和平面波基的计算成本比使用GGA功能的至少两个数量级。最近,我们提出了一种策略,将自适应压缩的交换操作员制定和多个时间步长集成方案组合以使计算成本降低到数量级[J.化学。物理。 151,151102(2019)]。在这项工作中,我们证明了这种方法在碱性水性介质中研究了化学反应,特别是甲酰胺水解。通过使用良好切片的元动力学方案执行我们的实施,我们可以在杂交DFT的水平下计算这种反应的二维自由能表面。这项工作还研究了PBE0(混合)和PBE(GGA)功能在预测该化学反应的自由能量方面的准确性。

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