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Spatially-Decomposed Free Energy of Solvation Based on the Endpoint Density-Functional Method

机译:基于终点密度 - 功能方法的空间 - 分解的溶剂化能量

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A spatially resolved version of the density-functional method for solvation thermodynamics is presented by extending the free-energy functional previously established in the one-dimensional, energy representation and formulating a new expression in a mixed four-dimensional representation (three dimensions for position and one dimension for energy). The space was further divided into a set of discrete regions with respect to the relative position of a solvent molecule from the solute, and the spatially decomposed energetics of solvation were analyzed for small molecules with a methyl, amine, or hydroxyl group and alanine dipeptide in solvent water. It was observed that the density of the solvation free energy is weakly dependent on the solute site in the excluded-volume region and is distinctively favorable in the first shells of the solute atoms that can readily form hydrogen bonds with water. The solvent-reorganization term reduces faster with the separation from the solute than the direct interaction between the solute and solvent, and the latter governs the energetics in the second shell and outer regions. The sum of the contributions to the free energy from the excluded volume and first shell was found to deviate significantly from the total sum over all the regions, implying that the solvation free energy is not spatially localized near the solute in a quantitative sense. Still, a local description was shown to be valid as confirmed by the correlation of the total value of free energy with the corresponding value obtained by integrating the free-energy density to the second shell. The theoretical framework developed in the present work to spatially decompose the solvation free energy can thus be useful to identify stabilizing or destabilizing regions of solvent proximate to a solute and to analyze the role that the displacement of interfacial water plays in the thermodynamics of molecular association.
机译:通过在一维,能量表示中建立的自由能函数延伸并在混合的四维表示中制定新表达(位置和位置的三维),通过延伸求解热力学的密度功能方法的空间函数函数方法能量的一个维度)。该空间进一步分为一组离散区域,相对于来自溶质的溶剂分子的相对位置,分析用甲基,胺或羟基和丙氨酸二肽的小分子分析溶剂化的空间分解的能量。溶剂水。观察到溶剂化自由能的密度弱依赖于排斥区域中的溶质位点,并且在溶质原子的第一个壳中具有明显有利的,其可以容易地与水形成氢键。溶剂重组术语随着溶质和溶剂之间的直接相互作用而比溶质的分离更快地降低,后者控制第二壳和外部区域的能量。发现来自排除的体积和第一个壳体的自由能的贡献总和从所有区域的总和显着偏离,这意味着溶剂化自由能在定量意义上溶于溶质附近的空间局部。尽管如此,局部描述被证明是有效的,通过通过将自由能密度与第二壳体集成到第二壳体所获得的相应值来证实。因此,在本作空间分解的本作工作中开发的理论框架可以是可用于鉴定靠近溶质的溶剂的稳定性或稳定的溶剂区域,并分析界面水在分子协会热力学中的发挥作用。

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