首页> 外文期刊>Journal of chemical theory and computation: JCTC >Quantitative Prediction of the Structure and Viscosity of Aqueous Micellar Solutions of Ionic Surfactants: A Combined Approach Based on Coarse-Grained MARTINI Simulations Followed by Reverse-Mapped All-Atom Molecular Dynamics Simulations
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Quantitative Prediction of the Structure and Viscosity of Aqueous Micellar Solutions of Ionic Surfactants: A Combined Approach Based on Coarse-Grained MARTINI Simulations Followed by Reverse-Mapped All-Atom Molecular Dynamics Simulations

机译:离子表面活性剂水性胶束溶液结构和粘度的定量预测:基于粗粒马提尼模拟的组合方法,随后是反向映射全原子分子动力学模拟

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摘要

We address the problem of the quantitative prediction of micelle formation in dilute aqueous solutions of ionic surfactants using sodium dodecyl sulfate (SDS) as a model system through a computational approach that involves three steps: (a) execution of coarse-grained simulations based on the MARTINI force field (with slightly modified parameters to afford the formation of large micelles); (b) reverse mapping of the final self-assembled coarse-grained configuration into an all-atom configuration; and (c) final relaxation of this all-atom configuration through short-time (on the order of a few tens of nanoseconds), detailed isothermal-isobaric molecular dynamics simulations using the CHARMM36 force field. For a given concentration of the solution in SDS molecules, the modified MARTINI-based coarse-grained simulations lead to the formation of large micelles characterized by mean aggregation numbers above the experimentally observed ones. However, by reintroducing the detailed chemical structure through a strategy that solves a well-defined geometric problem and re-equilibrating, these large micellar aggregates quickly dissolve to smaller ones and equilibrate to sizes that perfectly match the average micelle size measured experimentally at the given surfactant concentration. From the all-atom molecular dynamics simulations, we also deduce the surfactant diffusivity D-SDS and the zero-shear rate viscosity, eta(0), of the solution, which are observed to compare very favorably with the few experimental values that we were able to find in the literature.
机译:我们通过计算方法解决了使用十二烷基硫酸钠(SDS)作为模型系统的稀释水溶液中胶束形成的定量预测的问题,作为模型系统,涉及三个步骤:(a)基于粗粒模拟的粗粒模拟马蒂尼鸡尾酒力场(具有略微改进的参数,提供大胶束的形成); (b)反向映射最终的自组装粗粒化配置成全原子配置; (c)通过短时间(大约几十纳秒),使用CHARMM36力场的详细等温 - 异级分子动力学模拟来最终放松这种全原子配置。对于SDS分子中的溶液的给定浓度,改性的马蒂尼尼基的粗粒模拟导致形成大胶束,其特征在于实验观察到的单个聚集数。然而,通过通过解决明确定义的几何问题并重新平衡的策略重新引入详细的化学结构,这些大胶束聚集体迅速溶解于较小的聚集体并平衡到尺寸的尺寸,与在给定的表面活性剂上通过实验测量的平均胶束尺寸完全匹配的尺寸专注。从全原子分子动力学模拟中,我们还观察到溶液的表面活性剂扩散性D-SDS和零剪切速率粘度,ETA(0),这将观察到与我们所在的少数实验值非常有利地比较能够在文献中找到。

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