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首页> 外文期刊>Journal of Biomolecular Structure and Dynamics >Insight into the intermolecular recognition mechanism involved in complement component 4 activation through serine protease-trypsin
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Insight into the intermolecular recognition mechanism involved in complement component 4 activation through serine protease-trypsin

机译:通过丝氨酸蛋白酶 - 胰蛋白酶探视补体组分4激活的分子间识别机制

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Serine protease cleaved-complement component 4 (C4) at sessile loop, which is significant for completion of lectin and classical complement pathways at the time of infections. The co-crystalized structure of C4 with Mannose-binding protein-associated serine protease 2 (MASP2) provided the structural and functional aspects of its interaction and underlined the C4 activation by MASP2. The same study also revealed the significance of complement control protein (CCP) domain through mutational study, where mutated CCP domain led to the inhibition of C4 activation. However, the interaction of trypsin serine domain with C4a sessile loop revealed another aspect of C4 activation. The human C4 cleavage by Trypsin (Tryp) in a control manner was explored but not yet revealed the identification of cleaved fragments. Hence, the present study investigated the Tryp mediated C4 activation using computational approach (protein-protein docking and molecular dynamics simulation) by comparing with the co-crystalized structure of C4-MASP2. Docking result identified the crucial interacting residues Gly219, Glnl78, and AsnlO2 of Tryp catalytic pocket which were interacting with Arg756 and Glu759 (sessile loop) of a-Chain (C4) in a similar manner to C4-MASP2 co-crystallized complex. Moreover, MD simulation results and mutational study underlined the conformational rearrangements in the C4 due to the Tryp interaction. Comparative analysis of C4 alone, C4-Tryp, and C4-MASP2 revealed the impact of Tryp on C4 was similar as MASP2. These studies designate the role of sessile loop in the interaction with serine domain, which could be useful to understand the various interactions of C4 with other complement components.
机译:在无肉叶环中的丝氨酸蛋白酶切割补体组分4(C4),对于在感染时的凝集素和经典补体途径的完成是显着的。 C4的C4与甘露糖结合蛋白相关的丝氨酸蛋白酶2(MASP2)的共结晶结构提供了其相互作用的结构和功能方面,并通过MASP2加下C4活化。同样的研究还揭示了通过突变研究的补体对照蛋白(CCP)结构域的重要性,其中突变的CCP域导致C4活化的抑制。然而,胰蛋白酶丝氨酸域与C4a无梗塞环的相互作用揭示了C4活化的另一个方面。探讨了以对照方式的胰蛋白酶(Tryp)的人C4切割,但尚未揭示切割碎片的鉴定。因此,本研究通过与C4-MASP2的共结晶结构进行比较,研究了使用计算方法(蛋白质 - 蛋白质对接和分子动力学模拟)的胰浦介导的C4活化。对接结果鉴定了Trp催化袋的至关重要的相互作用残基GLY219,GLN178和ASNLO2,其与A-Chain2共结晶的复合物类似的方式与A-Chain(C4)的Arch756和Glu759(无柄环)相互作用。此外,MD仿真结果和突变研究由于探测器相互作用而下调C4中的构象重排。单独的C4的比较分析,C4-TROP和C4-MASP2揭示了TRYP在C4上的影响与MASP2相似。这些研究表明术术中的作用在与丝氨区的相互作用中,这对于了解C4与其他补体组分的各种相互作用是有用的。

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