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Usutu virus induced mass mortalities of songbirds in Central Europe: Are habitat models suitable to predict dead birds in unsampled regions?

机译:Usutu病毒在中欧的鸣禽诱发大量死亡:栖息地模型适合预测未夹杂地区的死亡鸟类吗?

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摘要

The Usutu virus (USUV) is a mosquito-borne flavivirus closely related to the better known West Nile virus, and it can cause mass mortalities of song birds. In the present paper, a dataset of georeferenced locations of USUV-positive birds was compiled and then used to map the geographical distribution of suitable USUV habitats in Central Europe. Six habitat models, comprising BIOCLIM, DOMAIN, maximum entropy model (MAXENT), generalized linear model (GLM), boosted regression trees model (BRT), and random forests model (RF), were selected and tested for their performance ability to predict cases of disease in unsampled areas. Suitability index maps, a diagram depicting model performance by the Area Under the Curve (AUC) vs. the True Skill Statistic (TSS), and a diagram ranking sensitivity vs. specificity as well as correct classification ratio (CCR) vs. mis-classification ratio (MCR) were presented. Of the models tested GLM, BRT, RF, and MAXENT were shown suitable to predict USUV-positive dead birds in unsampled regions, with BRT the highest predictive accuracy (AUC = 0.75, TSS = 0.50). However, the four models classified major parts of the model domain as USUV-suitable, although USUV was never confirmed there so far (MCR =0.49 to 0.61). DOMAIN and especially BIOCLIM can only be recommended for interpolating point observations to raster files, i.e. for analyzing observed USUV distributions (MCR = 0.10). Habitat models can be a helpful tool for informing veterinary authorities about the possible distribution of a given mosquito-borne disease. Nevertheless, it should be taken in consideration, that the spatial and temporal scales, the selection of an appropriate model, the availability of significant predictive variables as well as the representativeness and completeness of collected species or disease cases may strongly influence the modeling results.
机译:USUTU病毒(USUV)是一种与更好的尼罗河病毒密切相关的蚊子般的黄病毒,它可能导致歌鸟的大规模死亡。在本文中,编制了USUV阳性鸟类地理位置的地理位置的数据集,然后用于映射在中欧的合适USUV栖息地的地理分布。六种栖息地模型,包括Bioclim,域,最大熵模型(MaxEnt),广义线性模型(GLM),提升回归树模型(BRT)和随机森林模型(RF),并测试其性能能力来预测病例缺乏夹杂地区的疾病。适用性索引图,描绘了曲线下的区域的模型性能与真实技能统计(TSS)和图表对特异性以及正确的分类率(CCR)与错误分类的图表提出了比率(MCR)。在测试的模型中,BRT,RF和MaxENt被证明适用于预采样中的USUV阳性死鸟,具有最高的预测精度(AUC = 0.75,TSS = 0.50)。但是,四个模型将模型领域的主要部分分类为USUV-适用,尽管USUV到目前为止从未确认过(MCR = 0.49至0.61)。域,尤其是Bioclim只能建议用于将点观察插入栅格文件,即用于分析观察到的USUV分布(MCR = 0.10)。栖息地模型可以是一个有用的工具,可通知兽医机构有关给定蚊子疾病的可能分配。然而,应该考虑到,空间和时间尺度,选择适当的模型,显着的预测变量的可用性以及所收集的物种或疾病病例的代表性和完整性可能会强烈影响建模结果。

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