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Whole-Exome Sequencing Reveals Novel Genetic Variation for Dilated Cardiomyopathy in Pediatric Chinese Patients

机译:全拓序列揭示了小儿患者扩张心肌病的新型遗传变异

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摘要

Dilated cardiomyopathy (DCM) is characterized by left or bilateral ventricular dilation and systolic dysfunction without rational conditions, which can lead to progressive heart failure and sudden cardiac death. Most of the pathogenic genes have been reported in adult population by locus mapping in familial cases and animal model studies. However, it still remains challenging to decipher the role of genetics in the etiology of pediatric DCM. We applied whole-exome sequencing (WES) for 30 sporadic pediatric DCM subjects and 100 non-DCM local controls. We identified the pathogenic mutations using bioinformatics tools based on genomic strategies synergistically and confirmed mutations by Sanger sequencing. We identified compound heterozygous nonsense mutations in DSP (c.3799C>T, p.R1267X; c.4444G>T, p.E1482X). In sporadic cases, the two heterozygous mutations in XIRP2 were identified. Then we performed an exome-wide association study with 30 case and 100 control subjects. Interestingly, we could not identify TTN truncating variants in all cases. Collectively, we observed a significant risk signal between carriers of TTN deleterious missense variants and DCM risk (odds ratio 4.0, 95% confidence interval 1.1-22.2, p=3.12x10(-2)). Our observations expanded the spectrum of mutations and were valuable in the pre- and postnatal screening and genetic diagnosis for DCM.
机译:扩张的心肌病(DCM)的特征在于左侧或双侧心室扩张和没有合理条件的收缩功能障碍,这可能导致逐渐心力衰竭和突然的心脏死亡。大多数病原基因已在成人群中通过家族性病例和动物模型研究中的基因座映射报道。然而,在儿科DCM的病因中破译遗传学的作用仍然仍然具有挑战性。我们应用全面测序(WES)30次散发性儿科DCM受试者和100个非DCM局部控制。我们通过基于基因组策略的生物信息学工具识别出致病性突变协同和证实突变通过Sanger测序。我们在DSP中鉴定了化合物杂合子突变(C.3799C> T,P.R1267X; C.4444G> T,P.E1482x)。在散发病例中,鉴定了XIRP2中的两个杂合突变。然后我们用30例和100个控制主体进行了一项偏端的协会研究。有趣的是,我们无法识别所有情况下的TTN截断变体。总的来说,我们观察到TTN有害密码变体和DCM风险的载体之间的显着风险信号(赔率比4.0,95%置信区间1.1-22.2,P = 3.12x10(-2))。我们的观察结果扩展了突变的光谱,并且在预后筛查和DCM的遗传诊断中有价值。

著录项

  • 来源
    《Pediatric cardiology》 |2019年第5期|共8页
  • 作者单位

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Wuxi Peoples Hosp Ctr Clin Res Wuxi 214023 Peoples R China;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Echocardiog Nanjing 210008 Jiangsu Peoples R China;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

    Nanjing Med Univ Childrens Hosp Dept Cardiol 72 Guangzhou Rd Nanjing 210008 Jiangsu Peoples R;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 儿科学;
  • 关键词

    Pediatric dilated cardiomyopathy; Clinical genetics; Whole-exome sequencing; TTN mutations; Compound mutations;

    机译:儿科扩张心肌病;临床遗传学;全外膜测序;TTN突变;复合突变;

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