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Estimates of covariance functions for growth of Kordi sheep in Iran using random regression models

机译:使用随机回归模型估计伊朗的Kordi绵羊生长的协方差函数

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In the current paper, restricted maximum likelihood estimates of covariance functions for growth records from birth to 360 days of age in Kordi sheep population were estimated using random regression models (RRM). Kordi sheep is an important breed known for adaptability and resistance to unfavorable climatic conditions and suitable feed efficiency in mountainous regions of Iran. Data included 23,720 body weight records of 6730 Kordi lambs collected from 1989 to 2012 at Hossein Abad Kordi sheep Breeding Station in Shirvan city, North Khorasan province, Iran. Fixed effects in the model were lamb sex, birth type, and birth year as well as dam age. Legendre polynomials (LP) of order 3 was used for age to illustrate the average growth curve. In the random part, the functions with different orders were included to model variances associated to direct and maternal effects. Results showed that a model with LP of order 4,3,4,3 for direct additive genetic effects, animal permanent environmental effects, maternal additive genetic and maternal permanent environmental effects was sufficient to model changes in (co)variances with age, according to Akaike's Information Criterion (AIC) and Bayesian information criterion (BIC). Direct additive genetic and animal permanent environment variances increased with age. Direct heritability (h(a)(2)) increased with age from 0.133 +/- 0.021 at birth to 0.391 +/- 0.034 at 360 days of age. The ratio of animal permanent environmental variances to phenotypic variance (pe(2)) was 0.047 +/- 0.083 at birth, increased with age and reached 0.537 +/- 0.034 at the end of the growth trajectory. Maternal heritability (112) was 0.152 +/- 0.025 at birth decreased to 0.067 +/- 0.016 until weaning and then fluctuated between 0.06 and 0.10. The ratio of maternal permanent environmental variances to phenotypic variance (mpe(2)) was 0.082 +/- 0.02 at birth; however, it gradually decreased until the end of trajectory. The first eigenvalues of the coefficient matrices explained 69% and 91% of the total direct additive variance and maternal genetic variance, respectively. Direct genetic correlations ranged from low and negative to positively high, and generally decreased as the distance between tests increased. Current study has demonstrated that RRM have potential for modeling growth of Kordi sheep and a greater response to selection would be expected, if selection focuses on body weights from 30 days of age to 120 days of age.
机译:在目前的论文中,使用随机回归模型(RRM)估算了从出生于出生于Kordi绵羊群的出生时间到360天的增长记录的受协方差记录的最大可能性估计。 Kordi Sheep是一种重要的品种,以满足适应性和对伊朗山区山区的不利气候条件和适当的饲料效率。数据包括从1989年到2012年在伊朗的北霍拉桑省Shirvan City的Hossein Abad Kordi羊养殖站收集了23,720人的体重记录。模型中的固定效果是羊肉性交,出生类型和诞生年份以及大坝年龄。订单3的Legendre多项式(LP)用于年龄以说明平均生长曲线。在随机部件中,包含不同订单的功能以与直接和母体效应相关的模型差异。结果表明,据介绍,具有直接添加剂遗传效应,动物永久性环境影响,母体​​添加剂遗传遗传遗传症,母体添加剂遗传遗传遗传症,母体添加剂遗传遗传遗传症,母体添加剂遗传和母体永久环境效应的模型。 Akaike的信息标准(AIC)和贝叶斯信息标准(BIC)。直接添加剂遗传和动物永久环境差异随着年龄而增加。直接遗传性(H(a)(2))随年龄的增长增加,在出生时从0.133 +/- 0.021增加到360天的0.391 +/- 0.034。动物永久环境差异与表型方差的比例(PE(2))在出生时为0.047 +/- 0.083,随着年龄的增长而增加,在生长轨迹结束时达到0.537 +/- 0.034。产妇遗传性(112)在出生时为0.152 +/- 0.025降至0.067 +/- 0.016直至断奶,然后波动在0.06和0.10之间。母体永族环境差异与表型方差的比率(MPE(2))出生时为0.082 +/- 0.02;但是,它直到轨迹结束逐渐减小。系数矩阵的第一特征值分别解释了总直接添加剂方差的69%和91%,分别是母体遗传方差。随着试验之间的距离增加,直接遗传相关性范围为低且阴性呈低且阴性呈正高,并且通常降低。目前的研究表明,RRM有可能对Kordi绵羊的增长建模,并且预期对选择的更大反应,如果选择从50天到120天的体重侧重于体重。

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