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Comparative analysis of root transcriptome profiles between low- and high-cadmium-accumulating genotypes of wheat in response to cadmium stress

机译:镉胁迫下小麦低聚镉积累基因型与高镉累积基因型的比较分析

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摘要

Wheat, one of the most broadly cultivated and consumed food crops worldwide, can accumulate high Cd contents in their edible parts, which poses a major hazard to human health. Cd accumulation ability differs among varieties in wheat, but the underlying molecular mechanism is largely unknown. Here, key genes responsible for Cd accumulation between two contrasting wheat genotypes (low-Cd accumulation one L17, high-Cd accumulation one H17) were investigated. Total 1269 were differentially expressed genes (DEGs) in L17 after Cd treatment, whereas, 399 Cd-induced DEGs were found in H17. GO-GO network analysis showed that heme binding was the most active GO, and metal binding was the second one that associated with other GOs in response to Cd stress in both genotypes. Pathway-pathway network analysis showed that phenylpronanoid biosynthesis and glutathione metabolism were the top pathways in response to Cd stress in both genotypes. Furthermore, we found that DEGs related to ion binding, antioxidant defense mechanisms, sulfotransferase activity, and cysteine biosynthetic process were more enriched in L17. In conclusion, our results not only provide the foundation for further exploring the molecular mechanism of Cd accumulation in wheat but also supply new strategies for improving phytoremediation ability of wheat by genetic engineering.
机译:小麦,全球最广泛种植和消耗的食物作物之一,可以在其可食用部分中积累高CD含量,这给人类健康带来了重大危害。 CD累积能力在小麦品种中不同,但下面的分子机制在很大程度上是未知的。这里,研究了负责两种对比小麦基因型(低CD积累117,高CD积累1 H17)之间的CD积累的关键基因。在CD处理后,总共1269个在L17中是差异表达的基因(DEGS),而在H17中发现399℃。 Go-Go网络分析表明,血红素结合是最活跃的GO,金属结合是与其他GOS相关联的第二种,响应于两种基因型中的CD胁迫。途径途径网络分析表明,苯并丙烷生物合成和谷胱甘肽代谢是响应于两种基因型中的CD胁迫的顶部途径。此外,我们发现与离子结合,抗氧化防御机制,磺基转移酶活性和半胱氨酸生物合成过程有关的次数更富集。总之,我们的结果不仅为进一步探索小麦中CD积累的分子机制而且提供了改善小麦的植物化能力的基础。

著录项

  • 来源
    《Functional & integrative genomics》 |2019年第2期|共14页
  • 作者单位

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

    Chinese Acad Sci Chengdu Inst Biol 9 Sect 4 South RenMin Rd Chengdu 610041 Sichuan Peoples R China;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 基因工程(遗传工程);遗传学;
  • 关键词

    Wheat; Cadmium; RNA sequencing; GO-GO network; Pathway-pathway network;

    机译:小麦;镉;RNA测序;GO-GO网络;路径网络;

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