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Transcriptome analysis of Paecilomyces hepiali at different growth stages and culture additives to reveal putative genes in cordycepin biosynthesis

机译:不同生长阶段和培养添加剂在不同生长阶段和培养添加剂中的转录组分析,揭示冬虫夏素生物合成的推定基因

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摘要

Paecilomyces hepialid (PH) is an endoparasitic fungus of Cordyceps sinensis (CS) and has become a substitute for CS due to their similar pharmacological activities. Because the market demand for CS is difficult to satisfy, and cordycepin, the effective compound of CS, is difficult to industrially produce, we produced 5 samples of PH by culturing for different durations and adding different additives to the culture broth, and detected their cordycepin content with UPLC ESI MS/MS. Then we grouped these cultures into five transcriptome comparisons containing 3 time variable groups and 2 additive variable groups. We used next-generation (NG) sequencing methods to acquire transcriptomic information and investigated the response of gene expression to the additives and the influence of different growth stages. This work will contribute to a better understanding of purine metabolism in PH, and possibly in other Cordyceps species. It will provide a useful resource to further advance transcriptomics studies in Cordyceps species.
机译:博士霉素肝脏(pH)是冬虫夏草中的内甲虫真菌(CS),由于其类似的药理学活动而已成为CS的替代品。由于对Cs的市场需求难以满足,而冬虫氏素,CS的有效化合物难以在工业上生产,我们通过为不同的持续时间培养并将不同的添加剂添加到培养液中,产生了5个pH样品,并检测到它们的冬虫蛋白UPLC ESI MS / MS的内容。然后我们将这些培养物分为包含3个时间可变基团和2个添加剂可变基团的五种转录组比较。我们使用下一代(NG)测序方法来获取转录组信息并研究基因表达对添加剂的响应和不同生长阶段的影响。这项工作将有助于更好地理解pH中的嘌呤代谢,并且可能在其他冬虫夏草种类中。它将提供一种有用的资源,以进一步提前在冬虫夏草物种中进行转录组学研究。

著录项

  • 来源
    《Genomics》 |2018年第3期|共9页
  • 作者单位

    Beijing Normal Univ Beijing Key Lab Protect &

    Utilizat TCM Beijing 100875 Peoples R China;

    Beijing Normal Univ Beijing Key Lab Protect &

    Utilizat TCM Beijing 100875 Peoples R China;

    Beijing Normal Univ Beijing Key Lab Protect &

    Utilizat TCM Beijing 100875 Peoples R China;

    China Acad Chinese Med Sci Resource Ctr Chinese Mat Med Beijing 100700 Peoples R China;

    Chinese Acad Sci Beijing Inst Genom CAS Key Lab Genome Sci &

    Informat Beijing 100101 Peoples R;

    Chinese Acad Sci Beijing Inst Genom CAS Key Lab Genome Sci &

    Informat Beijing 100101 Peoples R;

    Beijing Normal Univ Beijing Key Lab Protect &

    Utilizat TCM Beijing 100875 Peoples R China;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 医学遗传学;
  • 关键词

    Transcriptome; Fungus; Cordycepin; Cordyceps; Illumina;

    机译:转录组;真菌;冬虫夏蛋白;冬虫夏草;illumina;
  • 入库时间 2022-08-20 03:11:08

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