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Genetic variant in CACNA1C is associated with PTSD in traumatized police officers

机译:CaCNA1C中的遗传变异与受灾警察中的可击办者有关

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摘要

Posttraumatic stress disorder (PTSD) is a debilitating psychiatric disorder that may develop after a traumatic event. Here we aimed to identify epigenetic and genetic loci associated with PTSD. We included 73 traumatized police officers with extreme phenotypes regarding symptom severity despite similar trauma history: n = 34 had PTSD and n = 39 had minimal PTSD symptoms. Epigenetic and genetic profiles were based on the Illumina HumanMethylation450 BeadChip. We searched for differentially methylated probes (DMPs) and differentially methylated regions (DMRs). For genetic associations we analyzed the CpG-SNPs present on the array. We detected no genome-wide significant DMPs and we did not replicate previously reported DMPs associated with PTSD. However, GSE analysis of the top 100 DMPs showed enrichment of three genes involved in the dopaminergic neurogenesis pathway. Furthermore, we observed a suggestive association of one relatively large DMR between patients and controls, which was located at the PAX8 gene and previously associated with other psychiatric disorders. Finally, we validated five PTSD-associated CpG-SNPs identified with the array using sanger sequencing. We subsequently replicated the association of one common SNP (rs1990322) in the CACNA1C locus with PTSD in an independent cohort of traumatized children. The CACNA1C locus was previously associated with other psychiatric disorders, but not yet with PTSD. Thus, despite the small sample size, inclusion of extreme symptom severity phenotypes in a highly homogenous traumatized cohort enabled detection of epigenetic and genetic loci associated with PTSD. Moreover, here we showed that genetically confounded 450K probes are informative for genetic association analysis.
机译:后测试症(PTSD)是一种在创伤事件发生后可能发展的衰弱精神疾病。在这里,我们旨在鉴定与PTSD相关的表观遗传和遗传基因座。我们包括73名创伤警察,具有极端表型关于症状严重程度,尽管具有类似的创伤史:n = 34具有PTSD,n = 39具有最小的可行科目为症状。表观遗传和遗传型材基于Illumina人甲基化450珠芯片。我们搜索了差异甲基化探针(DMP)和差异甲基化区域(DMRS)。对于基因关联,我们分析了阵列上存在的CPG-SNP。我们未检测到基因组显着的DMP,我们没有复制先前报告与PTSD相关的DMP。然而,前100名DMP的GSE分析显示出参与多巴胺能神经发生途径的三种基因的富集。此外,我们观察到患者和对照之间的一种相对大的DMR的暗示协会,其位于PAX8基因,并与其他精神病疾病相关联。最后,我们使用Sanger测序验证了使用阵列识别的五个关联的CPG-SNP。我们随后在CACNA1C基因座中复制了一个常见的SNP(RS1990322)与PTSD在独立的创伤儿童队列中的关联。 CaCNA1C基因座以前与其他精神疾病相关,但尚未与PTSD相关联。因此,尽管样品大小小,但在高度均匀的创伤队列中包含了极端症状严重性表型,使能检测与PTSD相关的表观遗传和遗传基因座。此外,在这里,我们表明遗传上混淆的450K探针是遗传关联分析的信息。

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    Acad Med Ctr Amsterdam Genome Diagnost Lab Dept Clin Genet Amsterdam Netherlands;

    Acad Med Ctr Dept Child &

    Adolescent Psychiat Amsterdam Netherlands;

    Acad Med Ctr Anxiety Disorders Dept Psychiat Amsterdam Netherlands;

    Acad Med Ctr Amsterdam Genome Diagnost Lab Dept Clin Genet Amsterdam Netherlands;

    Acad Med Ctr Anxiety Disorders Dept Psychiat Amsterdam Netherlands;

    Acad Med Ctr Amsterdam Genome Diagnost Lab Dept Clin Genet Amsterdam Netherlands;

    Acad Med Ctr Amsterdam Genome Diagnost Lab Dept Clin Genet Amsterdam Netherlands;

    Acad Med Ctr Anxiety Disorders Dept Psychiat Amsterdam Netherlands;

    Vrije Univ Amsterdam Med Ctr Dept Psychiat Amsterdam Netherlands;

    Acad Med Ctr Dept Child &

    Adolescent Psychiat Amsterdam Netherlands;

    Acad Med Ctr Anxiety Disorders Dept Psychiat Amsterdam Netherlands;

    Acad Med Ctr Amsterdam Genome Diagnost Lab Dept Clin Genet Amsterdam Netherlands;

    Acad Med Ctr Anxiety Disorders Dept Psychiat Amsterdam Netherlands;

    Acad Med Ctr Amsterdam Genome Diagnost Lab Dept Clin Genet Amsterdam Netherlands;

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  • 正文语种 eng
  • 中图分类 医学遗传学;
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