Fundamental drivers for endolithic microbial community assemblies in the hyperarid Atacama Desert

Meslier Victoria; Casero M. Cristina; Dailey Micah; Wierzchos Jacek; Ascaso Carmen; Artieda Octavio; McCullough P. R.; DiRuggiero Jocelyne

摘要

Summary > In hyperarid deserts, endolithic microbial communities colonize the rocks’ interior as a survival strategy. Yet, the composition of these communities and the drivers promoting their assembly are still poorly understood. We analysed the diversity and community composition of endoliths from four different lithic substrates – calcite, gypsum, ignimbrite and granite – collected in the hyperarid zone of the Atacama Desert, Chile. By combining microscopy, mineralogy, spectroscopy and high throughput sequencing, we found these communities to be highly specific to their lithic substrate, although they were all dominated by the same four main phyla, Cyanobacteria , Actinobacteria , Chloroflexi and Proteobacteria . Our finding indicates a fine scale diversification of the microbial reservoir driven by substrate properties. The data suggest that the overall rock chemistry and the light transmission properties of the substrates are not essential drivers of community structure and composition. Instead, we propose that the architecture of the rock, i.e., the space available for colonization and its physical structure, linked to water retention capabilities, is ultimately the driver of community diversity and composition at the dry limit of life. </abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> <div class="translation abstracttxt"> <span class="zhankaihshouqi fivelineshidden" id="abstract"> <span>机译：</span><Abstract XMLNS =“http://www.wiley.com/namespaces/wiley”type =“main”xml：lang =“en”> <title type =“main”> summary </ title> >沙漠，内透明的微生物社区作为生存战略殖民殖民地。然而，这些社区的构成和促进其大会的司机仍然明白。我们分析了四种不同岩石基材 - 方解石，石膏，IgniMbrite和花岗岩的多样性和群落组成 - 在阿塔卡马沙漠，智利的大桥区收集。通过组合显微镜，矿物学，光谱学和高通量测序，我们发现这些社区对其岩石基底具有高度特异性，尽管它们都是由相同的四个主要phyla，<i cyanobacteria </ i>， actinobacteria主导</ i>，氯咯克隆</ i>和蛋白噬菌体</ i>。我们的发现表明了由基质性质驱动的微生物储存器的精细尺寸多样化。数据表明，整体岩石化学和基板的透光性能不是社区结构和组成的必需驱动因素。相反，我们提出了岩石的结构，即殖民化的空间及其与水保留能力相关的空间，最终是群落多样性和组合的驾驶员在生命的干燥范围内。 </ p> </ abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> </div> <div class="record"> <h2 class="all_title" id="enpatent33" >著录项</h2> <ul> <li> <span class="lefttit">来源</span> <div style="width: 86%;vertical-align: text-top;display: inline-block;"> <a href='/journal-foreign-22868/'>《Environmental microbiology》</a> <b style="margin: 0 2px;">|</b><span>2018年第5期</span><b style="margin: 0 2px;">|</b><span>共17页</span> </div> </li> <li> <div class="author"> <span class="lefttit">作者</span> <p id="fAuthorthree" class="threelineshidden zhankaihshouqi"> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Meslier Victoria&option=202" target="_blank" rel="nofollow">Meslier Victoria;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Casero M. Cristina&option=202" target="_blank" rel="nofollow">Casero M. Cristina;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Dailey Micah&option=202" target="_blank" rel="nofollow">Dailey Micah;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Wierzchos Jacek&option=202" target="_blank" rel="nofollow">Wierzchos Jacek;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Ascaso Carmen&option=202" target="_blank" rel="nofollow">Ascaso Carmen;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Artieda Octavio&option=202" target="_blank" rel="nofollow">Artieda Octavio;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=McCullough P. R.&option=202" target="_blank" rel="nofollow">McCullough P. R.;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=DiRuggiero Jocelyne&option=202" target="_blank" rel="nofollow">DiRuggiero Jocelyne;</a> </p> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zkzz" style="display: none;">展开▼</span> </div> </li> <li> <div style="display: flex;"> <span class="lefttit">作者单位</span> <div style="position: relative;margin-left: 3px;max-width: 639px;"> <div class="threelineshidden zhankaihshouqi" id="fOrgthree"> <p>Department of BiologyThe Johns Hopkins UniversityBaltimore MD USA;</p> <p>Museo Nacional de Ciencias Naturales CSICMadrid Spain;</p> <p>Department of BiologyThe Johns Hopkins UniversityBaltimore MD USA;</p> <p>Museo Nacional de Ciencias Naturales CSICMadrid Spain;</p> <p>Museo Nacional de Ciencias Naturales CSICMadrid Spain;</p> <p>Departamento Biologica Vegetal Ecologia y ciencias de la TierraUniversidad de ExtremaduraPlasencia Spain;</p> <p>Department of Physics and AstronomyThe Johns Hopkins UniversityBaltimore MD USA;</p> <p>Department of BiologyThe Johns Hopkins UniversityBaltimore MD USA;</p> </div> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zhdw" style="display: none;">展开▼</span> </div> </div> </li> <li > <span class="lefttit">收录信息</span> <span style="width: 86%;vertical-align: text-top;display: inline-block;"></span> </li> <li> <span class="lefttit">原文格式</span> <span>PDF</span> </li> <li> <span class="lefttit">正文语种</span> <span>eng</span> </li> <li> <span class="lefttit">中图分类</span> <span><a href="https://www.zhangqiaokeyan.com/clc/183.html" title="微生物学">微生物学;</a></span> </li> <li class="antistop"> <span class="lefttit">关键词</span> <p style="width: 86%;vertical-align: text-top;"> </p> </li> </ul> </div> </div> <div class="literature cardcommon"> <div class="similarity "> <h3 class="all_title" id="enpatent66">相似文献</h3> <div class="similaritytab clearfix"> <ul> <li class="active" >外文文献</li> <li >中文文献</li> <li >专利</li> </ul> </div> <div class="similarity_details"> <ul > <li> <div> <b>1. </b><a class="enjiyixqcontent" href="/journal-foreign-detail/0704023229330.html">Fundamental drivers for endolithic microbial community assemblies in the hyperarid Atacama Desert</a> <b>[J]</b> . <span> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Meslier Victoria&option=202" target="_blank" rel="nofollow" class="tuijian_auth tuijian_authcolor">Meslier Victoria,</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Casero M. 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href="/patent-detail/06120101406059.html">用于通过示踪剂分析法对复杂异质群落进行微生物株系分析、确定其功能关系及相互作用以及合成包括给药微生物群集和接种微生物群集的微生物群集的方法、设备和系统</a> <b>[P]</b> . <span> 中国专利： CN110352250A </span> <span> . 2019-10-18</span> </div> </li> <li> <div> <b>2. </b><a class="enjiyixqcontent" href="/patent-detail/06120101394160.html">用于对复杂异质群落中的完整微生物株系进行分析、确定其功能关系及相互作用以及基于此来识别和合成生物活性改性剂的方法、设备和系统</a> <b>[P]</b> . <span> 中国专利： CN110366596A </span> <span> . 2019-10-22</span> </div> </li> <li> <div> <b>3. </b><a class="enjiyixqcontent" href="/patent-detail/06130406727011.html">Lens antiencandilamiento Sunlight directly or indirectly useful in desert areas, preferably in the Atacama Desert, or High Light daytime,Taking the maximum percentage of Light Transmission controlled and glasses, comprising the filter.</a> <b>[P]</b> . <span> 外国专利：  CL2018002510A1 </span> <span> . 2018-10-12</span> </div> <p class="zwjiyix translation" style="max-width: initial;height: auto;word-break: break-all;white-space: initial;text-overflow: 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