The diversity and biogeography of abundant and rare intertidal marine microeukaryotes explained by environment and dispersal limitation

Zhang Wenjing; Pan Yongbo; Yang Jun; Chen Huihuang; Holohan Bridget; Vaudrey Jamie; Lin Senjie; McManus George B.

摘要

Summary >Benthic microeukaryotes are key ecosystem drivers in marine sandy beaches, an important and dynamic environment; however, little is known about their diversity and biogeography on a large spatial scale. Here, we investigated the community composition and geographical distributions of benthic microeukaryotes using high‐throughput sequencing of the 18S rRNA gene and quantified the contributions of environmental factors and spatial separation on the distribution patterns of both rare and abundant taxa. We collected 36 intertidal samples at 12 sandy beaches from four regions that spanned distances from 0.001 to 12,000?km. We found 12,890 operational taxonomic units (OTUs; 97% sequence identity level) including members of all eukaryotic super‐groups and several phyla of uncertain position. Arthropoda and Diatomeae dominated the sequence reads in abundance, but Ciliophora and Discoba were the most diverse groups across all samples. About one‐third of the OTUs could not be definitively classified at a similarity level of 80%, supporting the view that a large number of rare and minute marine species may have escaped previous characterization. We found generally similar geographical patterns for abundant and rare microeukaryotic sub‐communities, and both showed a significant distance–decay similarity trend. Variation partitioning showed that both rare and abundant sub‐communities exhibited a slightly stronger response to environmental factors than spatial (distance) factors. However, the abundant sub‐community was strongly correlated with variations in spatial, environmental and sediment grain size factors (66% of variance explained), but the rare assemblage was not (16%). This suggests that different or more complex mechanisms generate and maintain diversity in the rare biosphere in this habitat. </abstract> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> <div class="translation abstracttxt"> <span class="zhankaihshouqi fivelineshidden" id="abstract"> <span>机译：</span><Abstract XMLNS =“http://www.wiley.com/namespaces/wiley”type =“main”xml：lang =“en”> <title type =“main”>摘要</ title> > benthic microdeukotes是海洋沙滩的主要生态系统司机，一个重要和充满活力的环境;然而，在大型空间尺度上对其多样性和生物地理知之甚少。在这里，我们研究了使用18S rRNA基因的高通量测序的群体微核核糖的社区组成和地理分布，并量化了环境因素和空间分离对稀有和丰富分类的分布模式的贡献。从四个地区，我们收集了36个intertival样本，从四个地区跨越0.001到12,000？Km的距离。我们发现12,890个运营分类单位（OTUS; 97％序列同一性水平），包括所有真核超级组的成员和几个不确定位置的近几个。节肢动物和达特玛醚以丰富的读数占据了序列，但Ciliophora和Discoba是所有样品中最多样化的团体。大约三分之一的OTU不能明确地分类为80％的相似度水平，支持大量罕见和微小的海洋物种可能已经逃脱了先前的表征。我们发现通常具有丰富和稀有微核亚群落的类似地理模式，两者都显示出显着的距离 - 衰减相似性趋势。变异分区表明，稀有和丰富的子社区均表现出对环境因素的略微响应而不是空间（距离）因素。然而，丰富的子社区与空间，环境和沉积物粒度因子的变化强烈相关（66％的差异解释），但罕见的组合不是（16％）。这表明不同或更复杂的机制在该栖息地的稀有生物圈中产生和维持多样性。</ p> </摘要> </span> <span class="z_kbtn z_kbtnclass hoverxs" style="display: none;">展开▼</span> </div> </div> <div class="record"> <h2 class="all_title" id="enpatent33" >著录项</h2> <ul> <li> <span class="lefttit">来源</span> <div style="width: 86%;vertical-align: text-top;display: inline-block;"> <a href='/journal-foreign-22868/'>《Environmental microbiology》</a> <b style="margin: 0 2px;">|</b><span>2018年第2期</span><b style="margin: 0 2px;">|</b><span>共15页</span> </div> </li> <li> <div class="author"> <span class="lefttit">作者</span> <p id="fAuthorthree" class="threelineshidden zhankaihshouqi"> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Zhang Wenjing&option=202" target="_blank" rel="nofollow">Zhang Wenjing;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Pan Yongbo&option=202" target="_blank" rel="nofollow">Pan Yongbo;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Yang Jun&option=202" target="_blank" rel="nofollow">Yang Jun;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Chen Huihuang&option=202" target="_blank" rel="nofollow">Chen Huihuang;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Holohan Bridget&option=202" target="_blank" rel="nofollow">Holohan Bridget;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Vaudrey Jamie&option=202" target="_blank" rel="nofollow">Vaudrey Jamie;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=Lin Senjie&option=202" target="_blank" rel="nofollow">Lin Senjie;</a> <a href="/search.html?doctypes=4_5_6_1-0_4-0_1_2_3_7_9&sertext=McManus George B.&option=202" target="_blank" rel="nofollow">McManus George B.;</a> </p> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zkzz" style="display: none;">展开▼</span> </div> </li> <li> <div style="display: flex;"> <span class="lefttit">作者单位</span> <div style="position: relative;margin-left: 3px;max-width: 639px;"> <div class="threelineshidden zhankaihshouqi" id="fOrgthree"> <p>State Key Laboratory of Marine Environmental ScienceMarine Biodiversity and Global Change Research Center Xiamen UniversityXiamen 361005 People's Republic of China;</p> <p>State Key Laboratory of Marine Environmental ScienceMarine Biodiversity and Global Change Research Center Xiamen UniversityXiamen 361005 People's Republic of China;</p> <p>Aquatic EcoHealth Group Key Laboratory of Urban Environment and Health Institute of Urban EnvironmentChinese Academy of SciencesXiamen 361021 People's Republic of China;</p> <p>Aquatic EcoHealth Group Key Laboratory of Urban Environment and Health Institute of Urban EnvironmentChinese Academy of SciencesXiamen 361021 People's Republic of China;</p> <p>Department of Marine SciencesUniversity of ConnecticutGroton CT 06340 USA;</p> <p>Department of Marine SciencesUniversity of ConnecticutGroton CT 06340 USA;</p> <p>State Key Laboratory of Marine Environmental ScienceMarine Biodiversity and Global Change Research Center Xiamen UniversityXiamen 361005 People's Republic of China;</p> <p>Department of Marine SciencesUniversity of ConnecticutGroton CT 06340 USA;</p> </div> <span class="z_kbtnclass z_kbtnclassall hoverxs" id="zhdw" style="display: none;">展开▼</span> </div> </div> </li> <li > <span class="lefttit">收录信息</span> <span style="width: 86%;vertical-align: text-top;display: inline-block;"></span> </li> <li> <span class="lefttit">原文格式</span> <span>PDF</span> </li> <li> <span class="lefttit">正文语种</span> <span>eng</span> </li> <li> <span class="lefttit">中图分类</span> <span><a href="https://www.zhangqiaokeyan.com/clc/183.html" title="微生物学">微生物学;</a></span> </li> <li class="antistop"> <span class="lefttit">关键词</span> <p style="width: 86%;vertical-align: text-top;"> </p> </li> </ul> </div> </div> <div class="literature cardcommon"> <div class="similarity "> <h3 class="all_title" 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